Information for 1-TGGGGCAAGA (Motif 6)

A G C T C T A G A C T G A C T G A C T G G T A C C T G A C T G A T A C G G T C A
Reverse Opposite:
A C G T A T G C A G C T A G C T A C T G G T A C A G T C G T A C A G T C T C G A
p-value:1e-10
log p-value:-2.332e+01
Information Content per bp:1.831
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif3.68%
Number of Background Sequences with motif284.4
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets56.8 +/- 23.3bp
Average Position of motif in Background47.9 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGGGGCAAGA--
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A G C T C T A G A C T G A C T G A C T G G T A C C T G A C T G A T A C G G T C A A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGGGGCAAGA
NATGTTGCAA--
 A C G T A C G T A G C T C T A G A C T G A C T G A C T G G T A C C T G A C T G A T A C G G T C A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGGGGCAAGA
TNNGGGCAG--
 A C G T A G C T C T A G A C T G A C T G A C T G G T A C C T G A C T G A T A C G G T C A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGGGGCAAGA--
-AAGGCAAGTGT
 A G C T C T A G A C T G A C T G A C T G G T A C C T G A C T G A T A C G G T C A A C G T A C G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGGGGCAAGA
NGTGGGCAT--
 A C G T A G C T C T A G A C T G A C T G A C T G G T A C C T G A C T G A T A C G G T C A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TGGGGCAAGA--
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T A G C T C T A G A C T G A C T G A C T G G T A C C T G A C T G A T A C G G T C A A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGGGGCAAGA---
NNTNNGGGGCGGNGNGN
 A C G T A C G T A C G T A C G T A G C T C T A G A C T G A C T G A C T G G T A C C T G A C T G A T A C G G T C A A C G T A C G T A C G T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGGGGCAAGA
-AGGTCA---
 A G C T C T A G A C T G A C T G A C T G G T A C C T G A C T G A T A C G G T C A
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGGGGCAAGA
TGGGGA----
 A G C T C T A G A C T G A C T G A C T G G T A C C T G A C T G A T A C G G T C A
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TGGGGCAAGA-
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T A C G T A C G T A G C T C T A G A C T G A C T G A C T G G T A C C T G A C T G A T A C G G T C A A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A