Information for 23-AGCTGCTTATGCC (Motif 37)

C G T A A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A A C G T C G T A C G T A A C T G A G T C C G T A A C T G A G T C A C G T
p-value:1e-5
log p-value:-1.239e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.3 +/- 15.2bp
Average Position of motif in Background40.1 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGCTGCTTATGCC--
AGATGCTRCTRCCHT
 C G T A A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G A G T C A G T C A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCTTATGCC
AGCAGCTGCT------
 A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G A G T C A G T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AGCTGCTTATGCC
CTCAGCAGCTGCTACTG--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G A G T C A G T C
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGCTGCTTATGCC
NCAGCTGCTG-----
 A C G T A C G T C G T A A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G A G T C A G T C
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGCTGCTTATGCC
CAGCTGNT------
 A C G T C G T A A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G A G T C A G T C
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCTTATGCC
AGCAGCTGCTNN----
 A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G A G T C A G T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCTTATGCC
CGCAGCTGCG------
 A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G A G T C A G T C
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGCTGCTTATGCC
CAGCTGTT------
 A C G T C G T A A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G A G T C A G T C
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGCTGCTTATGCC
NNGCAGCTGTC------
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G A G T C A G T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGCTGCTTATGCC
HCAGCTGDTN-----
 A C G T A C G T C G T A A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G A G T C A G T C
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T A C G T A C G T A C G T