Information for 12-CCGCCCGGCTTGT (Motif 23)

A G T C A G T C A C T G A G T C A G T C A G T C C T A G A C T G A G T C A C G T A C G T A C T G A C G T
Reverse Opposite:
G T C A A G T C C G T A G T C A A C T G A G T C A G T C C T A G A C T G A C T G A G T C A C T G A C T G
p-value:1e-8
log p-value:-1.901e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.6 +/- 28.0bp
Average Position of motif in Background41.4 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL001.1_MTE/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCGCCCGGCTTGT--
NCGACCGCTCCGCTCGAAA
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C C T A G A C T G A G T C A C G T A C G T A C T G A C G T A C G T A C G T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CCGCCCGGCTTGT
TACGCCCCGCCACTCTG--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C C T A G A C T G A G T C A C G T A C G T A C T G A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCGCCCGGCTTGT
GGTCCCGCCC-------
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C C T A G A C T G A G T C A C G T A C G T A C T G A C G T
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCGCCCGGCTTGT
TTTCCCGCCMAV-----
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C C T A G A C T G A G T C A C G T A C G T A C T G A C G T
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CCGCCCGGCTTGT
TCACCCCGCCCCAAATT-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C C T A G A C T G A G T C A C G T A C G T A C T G A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCCGGCTTGT
GCTCCGCCCMCY----
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C C T A G A C T G A G T C A C G T A C G T A C T G A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----CCGCCCGGCTTGT
NNTTCCCGCCC-------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C C T A G A C T G A G T C A C G T A C G T A C T G A C G T
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCGCCCGGCTTGT--
CCACACAGCAGGAGA
 A G T C A G T C A C T G A G T C A G T C A G T C C T A G A C T G A G T C A C G T A C G T A C T G A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCGCCCGGCTTGT
GACCCCCCGCTGTGC
 A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C C T A G A C T G A G T C A C G T A C G T A C T G A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

PB0143.1_Klf7_2/Jaspar

Match Rank:10
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CCGCCCGGCTTGT
AAGCATACGCCCAACTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C C T A G A C T G A G T C A C G T A C G T A C T G A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T A C G T A C G T