Information for 9-TGRWCWATTAKTT (Motif 7)

A C G T A C T G C T A G C G A T A G T C C G T A C G T A C G A T A C G T C G T A C A G T A C G T A C G T
Reverse Opposite:
C G T A C G T A G T C A A C G T C G T A C G T A A C G T C G A T A C T G G C T A G A T C A G T C C G T A
p-value:1e-15
log p-value:-3.672e+01
Information Content per bp:1.857
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.6 +/- 28.6bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0132.1_Pax6/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGRWCWATTAKTT---
TGATTAATTAATTGAC
 A C G T A C T G C T A G C G A T A G T C C G T A C G T A C G A T A C G T C G T A C A G T A C G T A C G T A C G T A C G T A C G T
A G C T C T A G T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T A C G T T A C G C G T A G T A C

MF0010.1_Homeobox_class/Jaspar

Match Rank:2
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:TGRWCWATTAKTT
-----AATTATT-
 A C G T A C T G C T A G C G A T A G T C C G T A C G T A C G A T A C G T C G T A C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TGRWCWATTAKTT
---GCAATTAG--
 A C G T A C T G C T A G C G A T A G T C C G T A C G T A C G A T A C G T C G T A C A G T A C G T A C G T
A C G T A C G T A C G T T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T

Lhx3/MA0135.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGRWCWATTAKTT-
-GATTAATTAATTT
 A C G T A C T G C T A G C G A T A G T C C G T A C G T A C G A T A C G T C G T A C A G T A C G T A C G T A C G T
A C G T T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T

Barhl1/MA0877.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGRWCWATTAKTT
--NNCAATTANN-
 A C G T A C T G C T A G C G A T A G T C C G T A C G T A C G A T A C G T C G T A C A G T A C G T A C G T
A C G T A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T

PH0008.1_Barx2/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGRWCWATTAKTT---
TAAGTAATTAGTTATA
 A C G T A C T G C T A G C G A T A G T C C G T A C G T A C G A T A C G T C G T A C A G T A C G T A C G T A C G T A C G T A C G T
C G A T G C T A T C G A A C T G G A C T G T C A G C T A C A G T C A G T C T G A T C A G A G C T A C G T C T G A G A C T C T G A

Msx3/MA0709.1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TGRWCWATTAKTT
---CCAATTAA--
 A C G T A C T G C T A G C G A T A G T C C G T A C G T A C G A T A C G T C G T A C A G T A C G T A C G T
A C G T A C G T A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T A C G T

Nobox/MA0125.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGRWCWATTAKTT
--ACCAATTA---
 A C G T A C T G C T A G C G A T A G T C C G T A C G T A C G A T A C G T C G T A C A G T A C G T A C G T
A C G T A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A A C G T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGRWCWATTAKTT
-AAACMATTAN--
 A C G T A C T G C T A G C G A T A G T C C G T A C G T A C G A T A C G T C G T A C A G T A C G T A C G T
A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T A C G T

VENTX/MA0724.1/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGRWCWATTAKTT
--ACCGATTAG--
 A C G T A C T G C T A G C G A T A G T C C G T A C G T A C G A T A C G T C G T A C A G T A C G T A C G T
A C G T A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G A C G T A C G T