Information for 6-TTGACCTTTGGAC (Motif 4)

C G A T C A G T C T A G T C G A G T A C A G T C C G A T A C G T A C G T T A C G C T A G C G T A A T G C
Reverse Opposite:
A T C G A C G T A G T C A T G C C G T A C G T A C G T A A C T G A C T G A C G T A G T C G C T A G C T A
p-value:1e-20
log p-value:-4.663e+01
Information Content per bp:1.802
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.3 +/- 29.2bp
Average Position of motif in Background69.4 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:TTGACCTTTGGAC---
-TGGACTTTGNNCTCN
 C G A T C A G T C T A G T C G A G T A C A G T C C G A T A C G T A C G T T A C G C T A G C G T A A T G C A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:TTGACCTTTGGAC----
-TGGACTTTGNNCTNTG
 C G A T C A G T C T A G T C G A G T A C A G T C C G A T A C G T A C G T T A C G C T A G C G T A A T G C A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Rarg/MA0859.1/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TTGACCTTTGGAC---
TTGACCTTTTGACCTT
 C G A T C A G T C T A G T C G A G T A C A G T C C G A T A C G T A C G T T A C G C T A G C G T A A T G C A C G T A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

RARA/MA0729.1/Jaspar

Match Rank:4
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TTGACCTTTGGAC---
CATTGACCTTTTGACCTC
 A C G T A C G T C G A T C A G T C T A G T C G A G T A C A G T C C G A T A C G T A C G T T A C G C T A G C G T A A T G C A C G T A C G T A C G T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C

Rarb/MA0857.1/Jaspar

Match Rank:5
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TTGACCTTTGGAC----
-TGACCTTTTGACCTTT
 C G A T C A G T C T A G T C G A G T A C A G T C C G A T A C G T A C G T T A C G C T A G C G T A A T G C A C G T A C G T A C G T A C G T
A C G T G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:6
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TTGACCTTTGGAC---
-TGACCTTTTGACCTC
 C G A T C A G T C T A G T C G A G T A C A G T C C G A T A C G T A C G T T A C G C T A G C G T A A T G C A C G T A C G T A C G T
A C G T A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

RXRG/MA0856.1/Jaspar

Match Rank:7
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TTGACCTTTGGAC--
-TGACCTTTGACCCC
 C G A T C A G T C T A G T C G A G T A C A G T C C G A T A C G T A C G T T A C G C T A G C G T A A T G C A C G T A C G T
A C G T A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

Rxra/MA0512.2/Jaspar

Match Rank:8
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TTGACCTTTGGAC--
-TGACCTTTGACCCC
 C G A T C A G T C T A G T C G A G T A C A G T C C G A T A C G T A C G T T A C G C T A G C G T A A T G C A C G T A C G T
A C G T A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTGACCTTTGGAC---
GTTGACCTTTGACCTTT
 A C G T C G A T C A G T C T A G T C G A G T A C A G T C C G A T A C G T A C G T T A C G C T A G C G T A A T G C A C G T A C G T A C G T
T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T

RXRB/MA0855.1/Jaspar

Match Rank:10
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TTGACCTTTGGAC--
-TGACCTTTGACCCC
 C G A T C A G T C T A G T C G A G T A C A G T C C G A T A C G T A C G T T A C G C T A G C G T A A T G C A C G T A C G T
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C