Information for 7-KGCACATAKGTKMASR (Motif 28)

A C G T A C T G A G T C C G T A A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C T G G T A C C G T A A T C G C T A G
Reverse Opposite:
G A T C A T G C A C G T A C T G G T A C C G T A A G T C G T C A A G C T C T G A A C G T A C T G A C G T A C T G A G T C G T C A
p-value:1e-8
log p-value:-1.949e+01
Information Content per bp:1.850
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.2 +/- 28.6bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2/MA0633.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:KGCACATAKGTKMASR
--NACATATGGN----
 A C G T A C T G A G T C C G T A A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C T G G T A C C G T A A T C G C T A G
A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T A C G T A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:KGCACATAKGTKMASR
--ANCATATGTT----
 A C G T A C T G A G T C C G T A A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C T G G T A C C G T A A T C G C T A G
A C G T A C G T C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T A C G T A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:KGCACATAKGTKMASR
--GACATATGTT----
 A C G T A C T G A G T C C G T A A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C T G G T A C C G T A A T C G C T A G
A C G T A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T A C G T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:KGCACATAKGTKMASR
---CCATATGT-----
 A C G T A C T G A G T C C G T A A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C T G G T A C C G T A A T C G C T A G
A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------KGCACATAKGTKMASR
CAGATGTGCACATACGT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C T G G T A C C G T A A T C G C T A G
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T A C G T A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------KGCACATAKGTKMASR
TACATGTGCACATAAAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C T G G T A C C G T A A T C G C T A G
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:KGCACATAKGTKMASR
--AACATATGTT----
 A C G T A C T G A G T C C G T A A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C T G G T A C C G T A A T C G C T A G
A C G T A C G T C T G A T G C A G T A C C G T A A C G T T G C A G A C T A C T G A C G T A G C T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---KGCACATAKGTKMASR
CGAAGCACACAAAATA---
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C T G G T A C C G T A A T C G C T A G
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:KGCACATAKGTKMASR
--ANCATATGGT----
 A C G T A C T G A G T C C G T A A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C T G G T A C C G T A A T C G C T A G
A C G T A C G T C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T A C G T A C G T A C G T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:KGCACATAKGTKMASR
--ANCATATGGT----
 A C G T A C T G A G T C C G T A A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C T G G T A C C G T A A T C G C T A G
A C G T A C G T C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T A C G T A C G T A C G T