p-value: | 1e-9 |
log p-value: | -2.172e+01 |
Information Content per bp: | 1.795 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.64% |
Number of Background Sequences with motif | 2.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 55.7 +/- 25.5bp |
Average Position of motif in Background | 28.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0164.1_Smad3_2/Jaspar
Match Rank: | 1 |
Score: | 0.53 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------TCGCCAGTCCGGC TACGCCCCGCCACTCTG-- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.53 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TCGCCAGTCCGGC --VBSYGTCTGG- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.53 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TCGCCAGTCCGGC ----CTGTCTGG- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 4 |
Score: | 0.52 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TCGCCAGTCCGGC-- -----GGTCTGGCAT |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 5 |
Score: | 0.51 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TCGCCAGTCCGGC----- ---SCAGYCADGCATGAC |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 6 |
Score: | 0.51 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCGCCAGTCCGGC---- NNTNNTGTCTGGNNTNG |
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ZBTB33/MA0527.1/Jaspar
Match Rank: | 7 |
Score: | 0.50 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TCGCCAGTCCGGC CTCTCGCGAGATCTG- |
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TFAP2B(var.3)/MA0813.1/Jaspar
Match Rank: | 8 |
Score: | 0.50 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCGCCAGTCCGGC- -TGCCCTGAGGGCA |
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ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 9 |
Score: | 0.50 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TCGCCAGTCCGGC- GTCWGCTGTYYCTCT |
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Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer
Match Rank: | 10 |
Score: | 0.50 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TCGCCAGTCCGGC--- -TCCCAGMCRAGCCCC |
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