Information for 5-TGGGCATTCTCTCCGG (Motif 21)

A C G T A C T G A C T G C T A G G T A C C G T A A C G T A C G T A G T C G A C T A G T C A C G T A T G C A G T C C T A G A T C G
Reverse Opposite:
A T G C A G T C A C T G A T C G C G T A A C T G C T G A A C T G G T C A C G T A A C G T A C T G A G T C A G T C A G T C C G T A
p-value:1e-10
log p-value:-2.518e+01
Information Content per bp:1.909
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.2 +/- 28.7bp
Average Position of motif in Background52.4 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGGCATTCTCTCCGG
-GGGGATTCCCCC---
 A C G T A C T G A C T G C T A G G T A C C G T A A C G T A C G T A G T C G A C T A G T C A C G T A T G C A G T C C T A G A T C G
A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGGGCATTCTCTCCGG
NGTGGGCAT---------
 A C G T A C G T A C G T A C T G A C T G C T A G G T A C C G T A A C G T A C G T A G T C G A C T A G T C A C G T A T G C A G T C C T A G A T C G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGCATTCTCTCCGG
NNNNTTGGGCACNNCN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G G T A C C G T A A C G T A C G T A G T C G A C T A G T C A C G T A T G C A G T C C T A G A T C G
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGGGCATTCTCTCCGG
NGGGGATTTCCC-----
 A C G T A C G T A C T G A C T G C T A G G T A C C G T A A C G T A C G T A G T C G A C T A G T C A C G T A T G C A G T C C T A G A T C G
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGGGCATTCTCTCCGG
-GGAAATTCCC-----
 A C G T A C T G A C T G C T A G G T A C C G T A A C G T A C G T A G T C G A C T A G T C A C G T A T G C A G T C C T A G A T C G
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TGGGCATTCTCTCCGG
GGGGATTTCC------
 A C G T A C T G A C T G C T A G G T A C C G T A A C G T A C G T A G T C G A C T A G T C A C G T A T G C A G T C C T A G A T C G
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----TGGGCATTCTCTCCGG
WDNCTGGGCA----------
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T A G G T A C C G T A A C G T A C G T A G T C G A C T A G T C A C G T A T G C A G T C C T A G A T C G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TGGGCATTCTCTCCGG
-GGGGATTTCC-----
 A C G T A C T G A C T G C T A G G T A C C G T A A C G T A C G T A G T C G A C T A G T C A C G T A T G C A G T C C T A G A T C G
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:TGGGCATTCTCTCCGG
------TTCCCGCCWG
 A C G T A C T G A C T G C T A G G T A C C G T A A C G T A C G T A G T C G A C T A G T C A C G T A T G C A G T C C T A G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

TEAD4/MA0809.1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TGGGCATTCTCTCCGG
--CACATTCCAT----
 A C G T A C T G A C T G C T A G G T A C C G T A A C G T A C G T A G T C G A C T A G T C A C G T A T G C A G T C C T A G A T C G
A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T A C G T A C G T