Information for 16-ACAGATCAAT (Motif 20)

C G T A A G T C C G T A A C T G C G T A C A G T T G A C C G T A G T C A A G C T
Reverse Opposite:
C T G A C A G T C G A T A C T G G T C A G C A T G T A C A C G T A C T G A C G T
p-value:1e-11
log p-value:-2.666e+01
Information Content per bp:1.845
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif146.7
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets45.5 +/- 24.4bp
Average Position of motif in Background55.0 +/- 35.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ACAGATCAAT
HNRAATCAAT
 C G T A A G T C C G T A A C T G C G T A C A G T T G A C C G T A G T C A A G C T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:ACAGATCAAT--
--DGATCRATAN
 C G T A A G T C C G T A A C T G C G T A C A G T T G A C C G T A G T C A A G C T A C G T A C G T
A C G T A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

PH0134.1_Pbx1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ACAGATCAAT-----
TCACCCATCAATAAACA
 A C G T A C G T C G T A A G T C C G T A A C T G C G T A C A G T T G A C C G T A G T C A A G C T A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

PB0144.1_Lef1_2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACAGATCAAT------
GAAGATCAATCACTTA
 C G T A A G T C C G T A A C T G C G T A C A G T T G A C C G T A G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ACAGATCAAT------
GAAGATCAATCACTAA
 C G T A A G T C C G T A A C T G C G T A C A G T T G A C C G T A G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

Tcf7/MA0769.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACAGATCAAT--
AAAGATCAAAGG
 C G T A A G T C C G T A A C T G C G T A C A G T T G A C C G T A G T C A A G C T A C G T A C G T
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

PB0074.1_Sox8_1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACAGATCAAT------
TNNAGAACAATANATNN
 A C G T C G T A A G T C C G T A A C T G C G T A C A G T T G A C C G T A G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACAGATCAAT-----
AAAGATCAAAGGGTT
 C G T A A G T C C G T A A C T G C G T A C A G T T G A C C G T A G T C A A G C T A C G T A C G T A C G T A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

ONECUT3/MA0757.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACAGATCAAT---
AAAAAATCAATAAT
 A C G T C G T A A G T C C G T A A C T G C G T A C A G T T G A C C G T A G T C A A G C T A C G T A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACAGATCAAT
CACAGN-----
 A C G T C G T A A G T C C G T A A C T G C G T A C A G T T G A C C G T A G T C A A G C T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T