Information for 13-ATCAATAAAG (Motif 17)

C G T A A G C T G T A C C G T A C T G A A C G T C G T A C G T A G T C A C T A G
Reverse Opposite:
A G T C A C G T G C A T C G A T C G T A A G C T A C G T A C T G C T G A G C A T
p-value:1e-12
log p-value:-2.942e+01
Information Content per bp:1.845
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif95.8
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets59.1 +/- 23.6bp
Average Position of motif in Background45.6 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--ATCAATAAAG
DGATCRATAN--
 A C G T A C G T C G T A A G C T G T A C C G T A C T G A A C G T C G T A C G T A G T C A C T A G
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:2
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----ATCAATAAAG
HNRAATCAAT----
 A C G T A C G T A C G T A C G T C G T A A G C T G T A C C G T A C T G A A C G T C G T A C G T A G T C A C T A G
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:3
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----ATCAATAAAG
AAAAAATCAATAAT-
 A C G T A C G T A C G T A C G T A C G T C G T A A G C T G T A C C G T A C T G A A C G T C G T A C G T A G T C A C T A G
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--ATCAATAAAG
TAATCGATAA--
 A C G T A C G T C G T A A G C T G T A C C G T A C T G A A C G T C G T A C G T A G T C A C T A G
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A A C G T A C G T

CUX2/MA0755.1/Jaspar

Match Rank:5
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--ATCAATAAAG
TAATCGATAA--
 A C G T A C G T C G T A A G C T G T A C C G T A C T G A A C G T C G T A C G T A G T C A C T A G
G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----ATCAATAAAG--
GAAGATCAATCACTTA
 A C G T A C G T A C G T A C G T C G T A A G C T G T A C C G T A C T G A A C G T C G T A C G T A G T C A C T A G A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

PBX1/MA0070.1/Jaspar

Match Rank:7
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--ATCAATAAAG
CCATCAATCAAA
 A C G T A C G T C G T A A G C T G T A C C G T A C T G A A C G T C G T A C G T A G T C A C T A G
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

PH0134.1_Pbx1/Jaspar

Match Rank:8
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------ATCAATAAAG-
TCACCCATCAATAAACA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T G T A C C G T A C T G A A C G T C G T A C G T A G T C A C T A G A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ATCAATAAAG----
CTACCAATAAAATTCT
 A C G T A C G T C G T A A G C T G T A C C G T A C T G A A C G T C G T A C G T A G T C A C T A G A C G T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:10
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----ATCAATAAAG--
GAAGATCAATCACTAA
 A C G T A C G T A C G T A C G T C G T A A G C T G T A C C G T A C T G A A C G T C G T A C G T A G T C A C T A G A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A