Information for 12-AACAGACAGAAGG (Motif 15)

C T G A G T C A T A G C G T C A T C A G C T G A A G T C T C G A A T C G G T C A C T G A A C T G C T A G
Reverse Opposite:
A G T C A G T C A G C T A C G T A T G C A C G T A C T G A G C T A G T C C A G T A C T G A C G T A G C T
p-value:1e-12
log p-value:-2.992e+01
Information Content per bp:1.764
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif35.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets58.3 +/- 27.6bp
Average Position of motif in Background53.7 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AACAGACAGAAGG-
----AACAGATGGC
 C T G A G T C A T A G C G T C A T C A G C T G A A G T C T C G A A T C G G T C A C T G A A C T G C T A G A C G T
A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AACAGACAGAAGG-
----AACAGATGGT
 C T G A G T C A T A G C G T C A T C A G C T G A A G T C T C G A A T C G G T C A C T G A A C T G C T A G A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AACAGACAGAAGG---
----CACAGCAGGGGG
 C T G A G T C A T A G C G T C A T C A G C T G A A G T C T C G A A T C G G T C A C T G A A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AACAGACAGAAGG
-CCAGACAG----
 C T G A G T C A T A G C G T C A T C A G C T G A A G T C T C G A A T C G G T C A C T G A A C T G C T A G
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:AACAGACAGAAGG
-------NGAAGC
 C T G A G T C A T A G C G T C A T C A G C T G A A G T C T C G A A T C G G T C A C T G A A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AACAGACAGAAGG---
-CCACACAGCAGGAGA
 C T G A G T C A T A G C G T C A T C A G C T G A A G T C T C G A A T C G G T C A C T G A A C T G C T A G A C G T A C G T A C G T
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AACAGACAGAAGG-
----AACAKATGGY
 C T G A G T C A T A G C G T C A T C A G C T G A A G T C T C G A A T C G G T C A C T G A A C T G C T A G A C G T
A C G T A C G T A C G T A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AACAGACAGAAGG
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T C T G A G T C A T A G C G T C A T C A G C T G A A G T C T C G A A T C G G T C A C T G A A C T G C T A G
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AACAGACAGAAGG
AACCGANA-----
 C T G A G T C A T A G C G T C A T C A G C T G A A G T C T C G A A T C G G T C A C T G A A C T G C T A G
C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AACAGACAGAAGG
-CCAGACRSVB--
 C T G A G T C A T A G C G T C A T C A G C T G A A G T C T C G A A T C G G T C A C T G A A C T G C T A G
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T