Information for 3-GCTGCTCCTCTCT (Motif 4)

A C T G A G T C A G C T A C T G A G T C A C G T A G T C A T G C A C G T A T G C A C G T A T G C A C G T
Reverse Opposite:
C G T A A T C G C G T A A T C G C G T A A T C G C T A G C G T A A C T G A G T C C T G A A C T G A G T C
p-value:1e-11
log p-value:-2.646e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.2 +/- 25.1bp
Average Position of motif in Background43.2 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCTCCTCTCT-
AGATGCTRCTRCCHT
 A C G T A C T G A G T C A G C T A C T G A G T C A C G T A G T C A T G C A C G T A T G C A C G T A T G C A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Spz1/MA0111.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCTGCTCCTCTCT
GCTGTTACCCT--
 A C T G A G T C A G C T A C T G A G T C A C G T A G T C A T G C A C G T A T G C A C G T A T G C A C G T
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCTGCTCCTCTCT
CNGTCCTCCC----
 A C G T A C T G A G T C A G C T A C T G A G T C A C G T A G T C A T G C A C G T A T G C A C G T A T G C A C G T
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCTGCTCCTCTCT--
-NNGCACCTTTCTCC
 A C T G A G T C A G C T A C T G A G T C A C G T A G T C A T G C A C G T A T G C A C G T A T G C A C G T A C G T A C G T
A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCTGCTCCTCTCT
---GCTCCG----
 A C T G A G T C A G C T A C T G A G T C A C G T A G T C A T G C A C G T A T G C A C G T A T G C A C G T
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.53
Offset:-7
Orientation:forward strand
Alignment:-------GCTGCTCCTCTCT
CTCAGCAGCTGCTACTG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G C T A C T G A G T C A C G T A G T C A T G C A C G T A T G C A C G T A T G C A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GCTGCTCCTCTCT
AGCAGCTGCTNN-----
 A C G T A C G T A C G T A C G T A C T G A G T C A G C T A C T G A G T C A C G T A G T C A T G C A C G T A T G C A C G T A T G C A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GCTGCTCCTCTCT
AGCAGCTGCT-------
 A C G T A C G T A C G T A C G T A C T G A G T C A G C T A C T G A G T C A C G T A G T C A T G C A C G T A T G C A C G T A T G C A C G T
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCTGCTCCTCTCT
--TTCTTATCTGT
 A C T G A G T C A G C T A C T G A G T C A C G T A G T C A T G C A C G T A T G C A C G T A T G C A C G T
A C G T A C G T A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T

PB0050.1_Osr1_1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCTCCTCTCT--
TNNTGCTACTGTNNNN
 A C G T A C T G A G T C A G C T A C T G A G T C A C G T A G T C A T G C A C G T A T G C A C G T A T G C A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T