Information for 16-TCTAATGATCACA (Motif 27)

A C G T A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C G T A G T C C G T A A G T C C G T A
Reverse Opposite:
C G A T A C T G C G A T A C T G G T C A A C G T A G T C C G T A A C G T A C G T C G T A A C T G G T C A
p-value:1e-8
log p-value:-2.062e+01
Information Content per bp:1.935
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 27.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EVX2/MA0888.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCTAATGATCACA
NNTAATTANN---
 A C G T A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C G T A G T C C G T A A G T C C G T A
T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C A C G T A C G T A C G T

EVX1/MA0887.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCTAATGATCACA
GNTAATTANN---
 A C G T A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C G T A G T C C G T A A G T C C G T A
A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C A C G T A C G T A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCTAATGATCACA-
TAATGATGATCACTA
 A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C G T A G T C C G T A A G T C C G T A A C G T
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

VAX1/MA0722.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCTAATGATCACA
-CTAATTAC----
 A C G T A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C G T A G T C C G T A A G T C C G T A
A C G T A G T C G A C T G T C A G T C A C G A T C A G T C T G A G A T C A C G T A C G T A C G T A C G T

VAX2/MA0723.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCTAATGATCACA
-CTAATTAC----
 A C G T A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C G T A G T C C G T A A G T C C G T A
A C G T A G T C G A C T G T C A G C T A C G A T C A G T C T G A A G T C A C G T A C G T A C G T A C G T

PDX1/MA0132.2/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCTAATGATCACA
-CTAATTAN----
 A C G T A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C G T A G T C C G T A A G T C C G T A
A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T G A A T G C A C G T A C G T A C G T A C G T

EMX1/MA0612.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCTAATGATCACA
CCTAATTACC---
 A C G T A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C G T A G T C C G T A A G T C C G T A
T G A C A G T C G A C T T C G A C G T A C G A T C A G T C T G A T A G C A G T C A C G T A C G T A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCTAATGATCACA
NNTAATTANN---
 A C G T A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C G T A G T C C G T A A G T C C G T A
A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T A C G T A C G T A C G T

HOXB2/MA0902.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCTAATGATCACA
NNTAATTANN---
 A C G T A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C G T A G T C C G T A A G T C C G T A
A C T G A G C T C G A T C T G A C G T A A G C T A C G T C T G A A T G C A G C T A C G T A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCTAATGATCACA
-NTAATGAGCT--
 A C G T A G T C A C G T C G T A C G T A A C G T A C T G C G T A A C G T A G T C C G T A A G T C C G T A
A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T