Information for 15-CACAGTACTGTGC (Motif 26)

A G T C C T G A G A T C C T G A A C T G A C G T T C G A A G T C A G C T A C T G A G C T A C T G A G T C
Reverse Opposite:
C T A G A G T C C T G A G T A C C T G A A C T G A C G T T C G A A G T C A G C T C A T G A G C T A C T G
p-value:1e-8
log p-value:-2.062e+01
Information Content per bp:1.790
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.8 +/- 23.4bp
Average Position of motif in Background34.4 +/- 3.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CACAGTACTGTGC--
TTCNAAGTACTTNNNNN
 A C G T A C G T A G T C C T G A G A T C C T G A A C T G A C G T T C G A A G T C A G C T A C T G A G C T A C T G A G T C A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CACAGTACTGTGC
------GCTGTG-
 A G T C C T G A G A T C C T G A A C T G A C G T T C G A A G T C A G C T A C T G A G C T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CACAGTACTGTGC
AGAGTCCAAAGTCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A G A T C C T G A A C T G A C G T T C G A A G T C A G C T A C T G A G C T A C T G A G T C
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------CACAGTACTGTGC
CANAGNNCAAAGTCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A G A T C C T G A A C T G A C G T T C G A A G T C A G C T A C T G A G C T A C T G A G T C
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CACAGTACTGTGC----
NNNANTGCAGTGCNNTT
 A G T C C T G A G A T C C T G A A C T G A C G T T C G A A G T C A G C T A C T G A G C T A C T G A G T C A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:6
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----CACAGTACTGTGC---
NTTMRCACNNNVSTGYKAANT
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A G A T C C T G A A C T G A C G T T C G A A G T C A G C T A C T G A G C T A C T G A G T C A C G T A C G T A C G T
G C A T A G C T G A C T T G C A C T G A T A G C C T G A A T G C G A T C A G C T T G C A T C A G A T C G G A C T T A C G G A C T A C T G C T G A C T G A G C T A G C A T

SOX8/MA0868.1/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CACAGTACTGTGC-
AACAATGTGCAGTGTT
 A C G T A C G T A G T C C T G A G A T C C T G A A C T G A C G T T C G A A G T C A G C T A C T G A G C T A C T G A G T C A C G T
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T

PH0117.1_Nkx3-1/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CACAGTACTGTGC-
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A G T C C T G A G A T C C T G A A C T G A C G T T C G A A G T C A G C T A C T G A G C T A C T G A G T C A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----CACAGTACTGTGC
AAACCACAGAN------
 A C G T A C G T A C G T A C G T A G T C C T G A G A T C C T G A A C T G A C G T T C G A A G T C A G C T A C T G A G C T A C T G A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:10
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----CACAGTACTGTGC
GGGGTCAAAGTCCAAT--
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A G A T C C T G A A C T G A C G T T C G A A G T C A G C T A C T G A G C T A C T G A G T C
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T A C G T A C G T