Information for 6-TCACACTCCA (Motif 23)

G A C T T G A C C G T A T G A C C G T A A G T C G C A T A T G C A T G C C G T A
Reverse Opposite:
C G A T T A C G A T C G C G T A A C T G C G A T A C T G C G A T A C T G C T G A
p-value:1e-9
log p-value:-2.156e+01
Information Content per bp:1.828
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.30%
Number of Background Sequences with motif233.6
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets35.9 +/- 22.3bp
Average Position of motif in Background50.2 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MGA/MA0801.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TCACACTCCA
TCACACCT--
 G A C T T G A C C G T A T G A C C G T A A G T C G C A T A T G C A T G C C G T A
G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TCACACTCCA-
-NSCACTYVAV
 G A C T T G A C C G T A T G A C C G T A A G T C G C A T A T G C A T G C C G T A A C G T
A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

PB0114.1_Egr1_2/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TCACACTCCA--
NNAGTCCCACTCNNNN
 A C G T A C G T A C G T A C G T G A C T T G A C C G T A T G A C C G T A A G T C G C A T A T G C A T G C C G T A A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCACACTCCA
KTTCACACCT--
 A C G T A C G T G A C T T G A C C G T A T G A C C G T A A G T C G C A T A T G C A T G C C G T A
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCACACTCCA
TCACACCT--
 G A C T T G A C C G T A T G A C C G T A A G T C G C A T A T G C A T G C C G T A
A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCACACTCCA-
-RSCACTYRAG
 G A C T T G A C C G T A T G A C C G T A A G T C G C A T A T G C A T G C C G T A A C G T
A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TCACACTCCA--
NNTTTTCACACCTTNNN
 A C G T A C G T A C G T A C G T A C G T G A C T T G A C C G T A T G A C C G T A A G T C G C A T A T G C A T G C C G T A A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCACACTCCA-
-ATCACCCCAT
 G A C T T G A C C G T A T G A C C G T A A G T C G C A T A T G C A T G C C G T A A C G T
A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCACACTCCA-
--CCACTTGAA
 G A C T T G A C C G T A T G A C C G T A A G T C G C A T A T G C A T G C C G T A A C G T
A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

TBX2/MA0688.1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCACACTCCA
TTTCACACCTN-
 A C G T A C G T G A C T T G A C C G T A T G A C C G T A A G T C G C A T A T G C A T G C C G T A
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T