Information for 2-GGAAGGCAAG (Motif 14)

C T A G T A C G T C G A C T G A C T A G C T A G A T G C T G C A C T G A A T C G
Reverse Opposite:
T A G C G A C T A C G T T A C G G A T C G A T C G A C T A G C T A T G C G A T C
p-value:1e-11
log p-value:-2.613e+01
Information Content per bp:1.534
Number of Target Sequences with motif303.0
Percentage of Target Sequences with motif52.60%
Number of Background Sequences with motif17254.9
Percentage of Background Sequences with motif38.48%
Average Position of motif in Targets48.8 +/- 26.4bp
Average Position of motif in Background50.0 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.82
Offset:2
Orientation:forward strand
Alignment:GGAAGGCAAG---
--AAGGCAAGTGT
 C T A G T A C G T C G A C T G A C T A G C T A G A T G C T G C A C T G A A T C G A C G T A C G T A C G T
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

MF0001.1_ETS_class/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGAAGGCAAG
ACCGGAAG-----
 A C G T A C G T A C G T C T A G T A C G T C G A C T G A C T A G C T A G A T G C T G C A C T G A A T C G
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGAAGGCAAG---
--CAGGTAAGTAT
 C T A G T A C G T C G A C T G A C T A G C T A G A T G C T G C A C T G A A T C G A C G T A C G T A C G T
A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGAAGGCAAG
NGAAGC----
 C T A G T A C G T C G A C T G A C T A G C T A G A T G C T G C A C T G A A T C G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGAAGGCAAG
AAAAGTCAA-
 C T A G T A C G T C G A C T G A C T A G C T A G A T G C T G C A C T G A A T C G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GGAAGGCAAG--
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T C T A G T A C G T C G A C T G A C T A G C T A G A T G C T G C A C T G A A T C G A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGAAGGCAAG
TGGGGAAGGGCM-
 A C G T A C G T A C G T C T A G T A C G T C G A C T G A C T A G C T A G A T G C T G C A C T G A A T C G
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGAAGGCAAG
AVCAGGAAGT----
 A C G T A C G T A C G T A C G T C T A G T A C G T C G A C T G A C T A G C T A G A T G C T G C A C T G A A T C G
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGAAGGCAAG---
AGGGAAGTCATTTCT
 A C G T A C G T C T A G T A C G T C G A C T G A C T A G C T A G A T G C T G C A C T G A A T C G A C G T A C G T A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGAAGGCAAG-
CGGAAGTGAAAC
 A C G T C T A G T A C G T C G A C T G A C T A G C T A G A T G C T G C A C T G A A T C G A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C