Information for 11-GCATCTAGCAGCAGCT (Motif 21)

C T A G A G T C C G T A A C G T A G T C A C G T C G T A A C T G T A G C C G T A A C T G A G T C C G T A A T C G A G T C A C G T
Reverse Opposite:
C G T A A C T G T A G C A C G T A C T G A G T C A C G T A T C G A G T C A C G T G T C A A C T G G T C A A C G T A C T G A G T C
p-value:1e-8
log p-value:-2.064e+01
Information Content per bp:1.923
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 26.3bp
Average Position of motif in Background15.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCATCTAGCAGCAGCT
-ADGGYAGYAGCATCT
 C T A G A G T C C G T A A C G T A G T C A C G T C G T A A C T G T A G C C G T A A C T G A G T C C G T A A T C G A G T C A C G T
A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GCATCTAGCAGCAGCT
------AGCAGCTGCT
 C T A G A G T C C G T A A C G T A G T C A C G T C G T A A C T G T A G C C G T A A C T G A G T C C G T A A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GCATCTAGCAGCAGCT---
-------NNAGCAGCTGCT
 C T A G A G T C C G T A A C G T A G T C A C G T C G T A A C T G T A G C C G T A A C T G A G T C C G T A A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GCATCTAGCAGCAGCT------
-----NNNNAGCAGCTGCTGAN
 C T A G A G T C C G T A A C G T A G T C A C G T C G T A A C T G T A G C C G T A A C T G A G T C C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:GCATCTAGCAGCAGCT--
--------CAGCAGCTGN
 C T A G A G T C C G T A A C G T A G T C A C G T C G T A A C T G T A G C C G T A A C T G A G T C C G T A A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GCATCTAGCAGCAGCT---
------NGNGACAGCTGCN
 C T A G A G T C C G T A A C G T A G T C A C G T C G T A A C T G T A G C C G T A A C T G A G T C C G T A A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.54
Offset:9
Orientation:forward strand
Alignment:GCATCTAGCAGCAGCT-
---------ANCAGCTG
 C T A G A G T C C G T A A C G T A G T C A C G T C G T A A C T G T A G C C G T A A C T G A G T C C G T A A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCATCTAGCAGCAGCT
NNTGTAGGTAGCANNT
 C T A G A G T C C G T A A C G T A G T C A C G T C G T A A C T G T A G C C G T A A C T G A G T C C G T A A T C G A G T C A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GCATCTAGCAGCAGCT
------CGCAGCTGCG
 C T A G A G T C C G T A A C G T A G T C A C G T C G T A A C T G T A G C C G T A A C T G A G T C C G T A A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

PB0154.1_Osr1_2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCATCTAGCAGCAGCT
NNNTTAGGTAGCNTNT
 C T A G A G T C C G T A A C G T A G T C A C G T C G T A A C T G T A G C C G T A A C T G A G T C C G T A A T C G A G T C A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T