Information for 3-CCGCGCTAMA (Motif 6)

T G A C A G T C A C T G A T G C A C T G A G T C A C G T C G T A G T C A G T C A
Reverse Opposite:
A C G T A C G T G C A T T G C A A C T G A G T C A T C G A G T C T C A G A C T G
p-value:1e-10
log p-value:-2.491e+01
Information Content per bp:1.779
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif90.5
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets41.4 +/- 20.7bp
Average Position of motif in Background49.9 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCGCGCTAMA---
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T T G A C A G T C A C T G A T G C A C T G A G T C A C G T C G T A G T C A G T C A A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCGCGCTAMA-
TTCGCGCGAAAA
 A C G T T G A C A G T C A C T G A T G C A C T G A G T C A C G T C G T A G T C A G T C A A C G T
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCGCGCTAMA---
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T T G A C A G T C A C T G A T G C A C T G A G T C A C G T C G T A G T C A G T C A A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCGCGCTAMA
---NGCTN--
 T G A C A G T C A C T G A T G C A C T G A G T C A C G T C G T A G T C A G T C A
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCGCGCTAMA
AGCGCGCC---
 A C G T T G A C A G T C A C T G A T G C A C T G A G T C A C G T C G T A G T C A G T C A
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCGCGCTAMA-
-GGCGGGAAAH
 T G A C A G T C A C T G A T G C A C T G A G T C A C G T C G T A G T C A G T C A A C G T
A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

E2F1/MA0024.3/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCGCGCTAMA
TTTGGCGCCAAA
 A C G T A C G T T G A C A G T C A C T G A T G C A C T G A G T C A C G T C G T A G T C A G T C A
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

PB0008.1_E2F2_1/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CCGCGCTAMA
ATAAAGGCGCGCGAT-
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C A C T G A T G C A C T G A G T C A C G T C G T A G T C A G T C A
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CCGCGCTAMA
NCANGCGCGCGCGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C A C T G A T G C A C T G A G T C A C G T C G T A G T C A G T C A
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CCGCGCTAMA
ATAAGGGCGCGCGAT-
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C A C T G A T G C A C T G A G T C A C G T C G T A G T C A G T C A
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T A C G T