Information for 7-AGCAAGTCGGTGC (Motif 16)

T C G A T A C G T A G C T G C A T C G A T A C G A C G T A T G C A T C G A T C G A C G T A T C G T A G C
Reverse Opposite:
A T C G T A G C T G C A T A G C T A G C T A C G T G C A A T G C A G C T A C G T A T C G A T G C A G C T
p-value:1e-9
log p-value:-2.079e+01
Information Content per bp:1.482
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.4 +/- 9.4bp
Average Position of motif in Background23.7 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:AGCAAGTCGGTGC
-------CGGAGC
 T C G A T A C G T A G C T G C A T C G A T A C G A C G T A T G C A T C G A T C G A C G T A T C G T A G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGCAAGTCGGTGC-
--GGGGGCGGGGCC
 T C G A T A C G T A G C T G C A T C G A T A C G A C G T A T G C A T C G A T C G A C G T A T C G T A G C A C G T
A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGCAAGTCGGTGC--
-ACATGCCCGGGCAT
 T C G A T A C G T A G C T G C A T C G A T A C G A C G T A T G C A T C G A T C G A C G T A T C G T A G C A C G T A C G T
A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGCAAGTCGGTGC
-RGKGGGCGGAGC
 T C G A T A C G T A G C T G C A T C G A T A C G A C G T A T G C A T C G A T C G A C G T A T C G T A G C
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGCAAGTCGGTGC
---GAGSCCGAGC
 T C G A T A C G T A G C T G C A T C G A T A C G A C G T A T G C A T C G A T C G A C G T A T C G T A G C
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGCAAGTCGGTGC-----
NRRRCAWGTCCDGRCATGYY
 A C G T A C G T T C G A T A C G T A G C T G C A T C G A T A C G A C G T A T G C A T C G A T C G A C G T A T C G T A G C A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C T A G C T G A A G T C G C T A C G A T A T C G G A C T G A T C A G T C C T G A C T A G C T A G A G T C G C T A C G A T C T A G G A T C G A T C

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGCAAGTCGGTGC
GGGNGGGGGCGGGGC
 A C G T A C G T T C G A T A C G T A G C T G C A T C G A T A C G A C G T A T G C A T C G A T C G A C G T A T C G T A G C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGCAAGTCGGTGC-----
NNNGCATGTCNNGACATGCN
 A C G T A C G T T C G A T A C G T A G C T G C A T C G A T A C G A C G T A T G C A T C G A T C G A C G T A T C G T A G C A C G T A C G T A C G T A C G T A C G T
G T C A T C G A C T A G C T A G A G T C G T C A C G A T C T A G G A C T G A T C G A T C T C A G C T A G C T G A A G T C G C T A C A G T T C A G G A T C G A T C

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGCAAGTCGGTGC---
NAGANTGGCGGGGNGNA
 A C G T T C G A T A C G T A G C T G C A T C G A T A C G A C G T A T G C A T C G A T C G A C G T A T C G T A G C A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGCAAGTCGGTGC
--GGGGGCGGGGC
 T C G A T A C G T A G C T G C A T C G A T A C G A C G T A T G C A T C G A T C G A C G T A T C G T A G C
A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C