Information for 1-GAAGNCGCCCGGAGGG (Motif 1)

A C T G C T G A G C T A A C T G C T G A A G T C T A C G A G T C A G T C A T G C A C T G A C T G T C G A A C T G A T C G A C T G
Reverse Opposite:
A G T C A T G C A G T C A G C T A G T C A G T C A T C G A C T G T C A G A G T C A C T G A G C T A G T C C G A T A G C T A G T C
p-value:1e-13
log p-value:-3.070e+01
Information Content per bp:1.808
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.2 +/- 19.0bp
Average Position of motif in Background50.1 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0101.1_Zic1_1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GAAGNCGCCCGGAGGG-
---CACCCCCGGGGGGG
 A C T G C T G A G C T A A C T G C T G A A G T C T A C G A G T C A G T C A T G C A C T G A C T G T C G A A C T G A T C G A C T G A C G T
A C G T A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GAAGNCGCCCGGAGGG--
---CCCCCCCGGGGGGGT
 A C T G C T G A G C T A A C T G C T G A A G T C T A C G A G T C A G T C A T G C A C T G A C T G T C G A A C T G A T C G A C T G A C G T A C G T
A C G T A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GAAGNCGCCCGGAGGG--
---CCCCCCCGGGGGGGT
 A C T G C T G A G C T A A C T G C T G A A G T C T A C G A G T C A G T C A T G C A C T G A C T G T C G A A C T G A T C G A C T G A C G T A C G T
A C G T A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GAAGNCGCCCGGAGGG-----
----ANTNCCGGGGGGAANTT
 A C T G C T G A G C T A A C T G C T G A A G T C T A C G A G T C A G T C A T G C A C T G A C T G T C G A A C T G A T C G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GAAGNCGCCCGGAGGG--
-----TGCCCNNAGGGCA
 A C T G C T G A G C T A A C T G C T G A A G T C T A C G A G T C A G T C A T G C A C T G A C T G T C G A A C T G A T C G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GAAGNCGCCCGGAGGG--
-----TGCCCTNAGGGCA
 A C T G C T G A G C T A A C T G C T G A A G T C T A C G A G T C A G T C A T G C A C T G A C T G T C G A A C T G A T C G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GAAGNCGCCCGGAGGG--
-----TGCCCTNAGGGCA
 A C T G C T G A G C T A A C T G C T G A A G T C T A C G A G T C A G T C A T G C A C T G A C T G T C G A A C T G A T C G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GAAGNCGCCCGGAGGG-
-----TGCCCNGGGGCA
 A C T G C T G A G C T A A C T G C T G A A G T C T A C G A G T C A G T C A T G C A C T G A C T G T C G A A C T G A T C G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GAAGNCGCCCGGAGGG
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C T G C T G A G C T A A C T G C T G A A G T C T A C G A G T C A G T C A T G C A C T G A C T G T C G A A C T G A T C G A C T G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GAAGNCGCCCGGAGGG---
----ATTCCCTGAGGGGAA
 A C T G C T G A G C T A A C T G C T G A A G T C T A C G A G T C A G T C A T G C A C T G A C T G T C G A A C T G A T C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A