Information for 5-TTGCATAAAG (Motif 9)

A G C T A C G T A C T G T A G C C G T A A G C T C T G A C T G A G T C A A C T G
Reverse Opposite:
A G T C A C G T A G C T A G C T C T G A A C G T A C T G G T A C C G T A C T G A
p-value:1e-9
log p-value:-2.231e+01
Information Content per bp:1.855
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.6 +/- 29.8bp
Average Position of motif in Background70.4 +/- 36.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TTGCATAAAG
VTTRCATAAY-
 A C G T A G C T A C G T A C T G T A G C C G T A A G C T C T G A C T G A G T C A A C T G
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:2
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TTGCATAAAG
ATTGCATAA--
 A C G T A G C T A C G T A C T G T A G C C G T A A G C T C T G A C T G A G T C A A C T G
T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TTGCATAAAG--
CAATTGCAAAAATAT
 A C G T A C G T A C G T A G C T A C G T A C T G T A G C C G T A A G C T C T G A C T G A G T C A A C T G A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TTGCATAAAG
ATTTGCATAA--
 A C G T A C G T A G C T A C G T A C T G T A G C C G T A A G C T C T G A C T G A G T C A A C T G
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TTGCATAAAG
ATTGCACAATA
 A C G T A G C T A C G T A C T G T A G C C G T A A G C T C T G A C T G A G T C A A C T G
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------TTGCATAAAG
TNTAATTTGCATANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G T A G C C G T A A G C T C T G A C T G A G T C A A C T G
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------TTGCATAAAG
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G T A G C C G T A A G C T C T G A C T G A G T C A A C T G
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------TTGCATAAAG
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G T A G C C G T A A G C T C T G A C T G A G T C A A C T G
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTGCATAAAG
ATTTGCATAT--
 A C G T A C G T A G C T A C G T A C T G T A G C C G T A A G C T C T G A C T G A G T C A A C T G
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TTGCATAAAG
TTCATTTGCATAT--
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G T A G C C G T A A G C T C T G A C T G A G T C A A C T G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T