Information for 6-GCAGTGCCTGCTG (Motif 12)

A C T G A G T C C G T A A C T G A C G T A C T G A G T C A T G C A C G T A C T G A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A G T C T C G A A T C G A C T G A G T C G T C A A G T C A C G T A C T G T A G C
p-value:1e-9
log p-value:-2.139e+01
Information Content per bp:1.897
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets67.3 +/- 19.4bp
Average Position of motif in Background36.2 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.66
Offset:6
Orientation:forward strand
Alignment:GCAGTGCCTGCTG---
------CCTGCTGAGH
 A C T G A G T C C G T A A C T G A C G T A C T G A G T C A T G C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GCAGTGCCTGCTG-----
---TNTCCTGCTGTGNNG
 A C T G A G T C C G T A A C T G A C G T A C T G A G T C A T G C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GCAGTGCCTGCTG-----
---NNTCCTGCTGTGNNN
 A C T G A G T C C G T A A C T G A C G T A C T G A G T C A T G C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCAGTGCCTGCTG-----
---TCNCCTGCTGNGNNN
 A C T G A G T C C G T A A C T G A C G T A C T G A G T C A T G C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCAGTGCCTGCTG--
---CCCCCTGCTGTG
 A C T G A G T C C G T A A C T G A C G T A C T G A G T C A T G C A C G T A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GCAGTGCCTGCTG
NNNANTGCAGTGCNNTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A G T C A T G C A C G T A C T G A G T C A C G T A C T G
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCAGTGCCTGCTG---
-GGCCYCCTGCTGDGH
 A C T G A G T C C G T A A C T G A C G T A C T G A G T C A T G C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GCAGTGCCTGCTG---
------CCAGCTGTTN
 A C T G A G T C C G T A A C T G A C G T A C T G A G T C A T G C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GCAGTGCCTGCTG
NNNNTGCCAGTGATTG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A G T C A T G C A C G T A C T G A G T C A C G T A C T G
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCAGTGCCTGCTG----
--ANTGCCTGAGGCAAN
 A C T G A G T C C G T A A C T G A C G T A C T G A G T C A T G C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T