Information for 1-RCCTGGCCCGGGGCCT (Motif 1)

T C G A A T G C A T G C C G A T A T C G A T C G T G A C A G T C T A G C C A T G A C T G A C T G A C T G A G T C G T A C A C G T
Reverse Opposite:
C G T A A C T G A C T G G T A C G T A C G T A C G T A C A T C G A C T G A C T G A T G C A T G C C G T A A T C G A T C G A G C T
p-value:1e-11
log p-value:-2.651e+01
Information Content per bp:1.784
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.1 +/- 21.8bp
Average Position of motif in Background54.2 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:RCCTGGCCCGGGGCCT-
---GGGGCCGAGGCCTG
 T C G A A T G C A T G C C G A T A T C G A T C G T G A C A G T C T A G C C A T G A C T G A C T G A C T G A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--RCCTGGCCCGGGGCCT--
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T T C G A A T G C A T G C C G A T A T C G A T C G T G A C A G T C T A G C C A T G A C T G A C T G A C T G A G T C G T A C A C G T A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:RCCTGGCCCGGGGCCT
--------CTAGGCCT
 T C G A A T G C A T G C C G A T A T C G A T C G T G A C A G T C T A G C C A T G A C T G A C T G A C T G A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:RCCTGGCCCGGGGCCT
---TGCCCTNGGGCA-
 T C G A A T G C A T G C C G A T A T C G A T C G T G A C A G T C T A G C C A T G A C T G A C T G A C T G A G T C G T A C A C G T
A C G T A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:RCCTGGCCCGGGGCCT
---TGCCCNGGGGCA-
 T C G A A T G C A T G C C G A T A T C G A T C G T G A C A G T C T A G C C A T G A C T G A C T G A C T G A G T C G T A C A C G T
A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:RCCTGGCCCGGGGCCT
--------CNAGGCCT
 T C G A A T G C A T G C C G A T A T C G A T C G T G A C A G T C T A G C C A T G A C T G A C T G A C T G A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:RCCTGGCCCGGGGCCT-
-CTTGGCANNNTGCCAA
 T C G A A T G C A T G C C G A T A T C G A T C G T G A C A G T C T A G C C A T G A C T G A C T G A C T G A G T C G T A C A C G T A C G T
A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:RCCTGGCCCGGGGCCT
---TGCCCTNGGGCA-
 T C G A A T G C A T G C C G A T A T C G A T C G T G A C A G T C T A G C C A T G A C T G A C T G A C T G A G T C G T A C A C G T
A C G T A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:RCCTGGCCCGGGGCCT
--WTGSCCTSAGGS--
 T C G A A T G C A T G C C G A T A T C G A T C G T G A C A G T C T A G C C A T G A C T G A C T G A C T G A G T C G T A C A C G T
A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:RCCTGGCCCGGGGCCT
--ATGCCCTGAGGC--
 T C G A A T G C A T G C C G A T A T C G A T C G T G A C A G T C T A G C C A T G A C T G A C T G A C T G A G T C G T A C A C G T
A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T