Information for 5-CCTCACGGTCGCC (Motif 6)

A G T C A G T C A G C T A T G C C G T A A T G C A C T G A C T G A C G T A G T C A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C T G C G T A A G T C A G T C A T C G C G A T A T C G C T G A A C T G A C T G
p-value:1e-10
log p-value:-2.425e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.8 +/- 26.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCTCACGGTCGCC
ACCACTCTCGGTCAC-
 A C G T A C G T A C G T A G T C A G T C A G C T A T G C C G T A A T G C A C T G A C T G A C G T A G T C A C T G A G T C A G T C
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCTCACGGTCGCC
--TCAAGGTCAN-
 A G T C A G T C A G C T A T G C C G T A A T G C A C T G A C T G A C G T A G T C A C T G A G T C A G T C
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCTCACGGTCGCC---
TATTCAAGGTCATGCGA
 A C G T A G T C A G T C A G C T A T G C C G T A A T G C A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCTCACGGTCGCC---
ATTTACAGTAGCAAAA
 A G T C A G T C A G C T A T G C C G T A A T G C A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCTCACGGTCGCC
-NTCAAGGTCA--
 A G T C A G T C A G C T A T G C C G T A A T G C A C T G A C T G A C G T A G T C A C T G A G T C A G T C
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CCTCACGGTCGCC
--TCAAGGTCAT-
 A G T C A G T C A G C T A T G C C G T A A T G C A C T G A C T G A C G T A G T C A C T G A G T C A G T C
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CCTCACGGTCGCC
-BTCAAGGTCA--
 A G T C A G T C A G C T A T G C C G T A A T G C A C T G A C T G A C G T A G T C A C T G A G T C A G T C
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CCTCACGGTCGCC
WTGSCCTSAGGS-----
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T A T G C C G T A A T G C A C T G A C T G A C G T A G T C A C T G A G T C A G T C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCTCACGGTCGCC
AGTATTCTCGGTTGC-
 A C G T A C G T A C G T A G T C A G T C A G C T A T G C C G T A A T G C A C T G A C T G A C G T A G T C A C T G A G T C A G T C
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C A C G T

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CCTCACGGTCGCC
-----AGCGCGCC
 A G T C A G T C A G C T A T G C C G T A A T G C A C T G A C T G A C G T A G T C A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C