Information for 1-CKTTAATTAA (Motif 4)

G A T C A C T G A G C T A C G T C G T A C G T A A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T G T C A C G T A A C G T A C G T C G T A C T G A G T A C C T A G
p-value:1e-10
log p-value:-2.523e+01
Information Content per bp:1.868
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.1 +/- 27.8bp
Average Position of motif in Background41.9 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0011.1_Alx1_2/Jaspar

Match Rank:1
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--CKTTAATTAA-----
CGCATTAATTAATTGGC
 A C G T A C G T G A T C A C T G A G C T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A G T C T C A G G T A C C T G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A A G C T A G C T C T A G C T A G T G A C

PH0173.1_Uncx/Jaspar

Match Rank:2
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--CKTTAATTAA-----
CNCNTTAATTAATTANN
 A C G T A C G T G A T C A C T G A G C T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G A C A T C G A G T C T C A G A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A C G T A G C T C G T A A G C T A C T G

LMX1A/MA0702.1/Jaspar

Match Rank:3
Score:0.90
Offset:2
Orientation:forward strand
Alignment:CKTTAATTAA
--TTAATTAA
 G A T C A C T G A G C T A C G T C G T A C G T A A C G T A C G T C G T A C G T A
A C G T A C G T A G C T G A C T C T G A G C T A G C A T C G A T C T G A T C G A

PH0128.1_Otp/Jaspar

Match Rank:4
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--CKTTAATTAA-----
CNNATTAATTAATTNNN
 A C G T A C G T G A T C A C T G A G C T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T C A T C G A G A C T G A C T T C G A C T G A A G C T A C G T C T G A C T G A A G C T C G A T C T G A A G T C A C T G

PH0059.1_Hoxb4/Jaspar

Match Rank:5
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--CKTTAATTAA-----
CGCGTTAATTAATTACC
 A C G T A C G T G A T C A C T G A G C T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T A G C C T A G G T A C C T A G G A C T G A C T G T C A C G T A C G A T A C G T C T G A C T G A A G C T G C A T T G C A G T A C A G T C

Alx4/MA0853.1/Jaspar

Match Rank:6
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--CKTTAATTAA-----
CGCATTAATTAATTACC
 A C G T A C G T G A T C A C T G A G C T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G A C A T C G G A T C C T G A G A C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A G C T G C A T G T C A A T G C A G T C

PH0002.1_Alx4/Jaspar

Match Rank:7
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--CKTTAATTAA-----
CGCATTAATTAATTACC
 A C G T A C G T G A T C A C T G A G C T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G A C A T C G G A T C C T G A G A C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A G C T G C A T G T C A A T G C A G T C

Lhx4/MA0704.1/Jaspar

Match Rank:8
Score:0.88
Offset:2
Orientation:reverse strand
Alignment:CKTTAATTAA
--TTAATTAA
 G A T C A C T G A G C T A C G T C G T A C G T A A C G T A C G T C G T A C G T A
A C G T A C G T A G C T G A C T T C G A C G T A C G A T A C G T C T G A T C G A

PH0153.1_Prop1/Jaspar

Match Rank:9
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--CKTTAATTAA-----
CGAATTAATTAAGAAAC
 A C G T A C G T G A T C A C T G A G C T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G A C T C A G T G C A T C G A G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A C T G C G T A C G T A C T G A G A T C

PH0160.1_Shox2/Jaspar

Match Rank:10
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--CKTTAATTAA-----
CGCGTTAATTAATTGTG
 A C G T A C G T G A T C A C T G A G C T A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T A G C C A T G G T A C T A C G A G C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A C A G T A G C T T C A G C A G T A T C G