Information for 9-TTCGCAGGCA (Motif 20)

A G C T A G C T A G T C A T C G A G T C C G T A A C T G C A T G A T G C C T G A
Reverse Opposite:
A G C T A T C G G A T C A G T C G C A T A C T G A T G C C T A G T C G A C T G A
p-value:1e-8
log p-value:-1.868e+01
Information Content per bp:1.836
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif155.8
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets41.9 +/- 29.5bp
Average Position of motif in Background51.7 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTCGCAGGCA
HTTTCCCASG--
 A C G T A C G T A G C T A G C T A G T C A T C G A G T C C G T A A C T G C A T G A T G C C T G A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTCGCAGGCA
TGCCCAGNHW
 A G C T A G C T A G T C A T C G A G T C C G T A A C T G C A T G A T G C C T G A
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Stat6/MA0520.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTCGCAGGCA---
ANTTCTCAGGAANNN
 A C G T A C G T A G C T A G C T A G T C A T C G A G T C C G T A A C T G C A T G A T G C C T G A A C G T A C G T A C G T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTCGCAGGCA-
-TBGCACGCAA
 A G C T A G C T A G T C A T C G A G T C C G T A A C T G C A T G A T G C C T G A A C G T
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

NRF1/MA0506.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTCGCAGGCA-
TGCGCAGGCGC
 A G C T A G C T A G T C A T C G A G T C C G T A A C T G C A T G A T G C C T G A A C G T
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTCGCAGGCA
TTCTNMGGAA
 A G C T A G C T A G T C A T C G A G T C C G T A A C T G C A T G A T G C C T G A
C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTCGCAGGCA-
---BCAGACWA
 A G C T A G C T A G T C A T C G A G T C C G T A A C T G C A T G A T G C C T G A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTCGCAGGCA
NNTTGGCANN--
 A C G T A C G T A G C T A G C T A G T C A T C G A G T C C G T A A C T G C A T G A T G C C T G A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTCGCAGGCA
--CACAGN--
 A G C T A G C T A G T C A T C G A G T C C G T A A C T G C A T G A T G C C T G A
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTCGCAGGCA-
---CCAGACAG
 A G C T A G C T A G T C A T C G A G T C C G T A A C T G C A T G A T G C C T G A A C G T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G