Information for 9-CAAGCAGCGCTGG (Motif 17)

A G T C T C G A C T G A A C T G A G T C C G T A A C T G G T A C A C T G A G T C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C T G A G T C A C T G A G T C A C G T A C T G A G T C A G C T A C G T A C T G
p-value:1e-8
log p-value:-2.053e+01
Information Content per bp:1.915
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.6 +/- 20.7bp
Average Position of motif in Background31.6 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAAGCAGCGCTGG
GCCGCGCAGTGCGT-
 A C G T A C G T A G T C T C G A C T G A A C T G A G T C C G T A A C T G G T A C A C T G A G T C A C G T A C T G A C T G
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CAAGCAGCGCTGG
-------NGCTN-
 A G T C T C G A C T G A A C T G A G T C C G T A A C T G G T A C A C T G A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAAGCAGCGCTGG
GTCATGCHTGRCTGS
 A C G T A C G T A G T C T C G A C T G A A C T G A G T C C G T A A C T G G T A C A C T G A G T C A C G T A C T G A C T G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAAGCAGCGCTGG
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T A G T C T C G A C T G A A C T G A G T C C G T A A C T G G T A C A C T G A G T C A C G T A C T G A C T G
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CAAGCAGCGCTGG---
NNNNTGAGCACTGTNNG
 A C G T A G T C T C G A C T G A A C T G A G T C C G T A A C T G G T A C A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CAAGCAGCGCTGG
NNTCCTGCTGTGNNN-
 A C G T A C G T A C G T A G T C T C G A C T G A A C T G A G T C C G T A A C T G G T A C A C T G A G T C A C G T A C T G A C T G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CAAGCAGCGCTGG
TCNCCTGCTGNGNNN-
 A C G T A C G T A C G T A G T C T C G A C T G A A C T G A G T C C G T A A C T G G T A C A C T G A G T C A C G T A C T G A C T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CAAGCAGCGCTGG
TNTCCTGCTGTGNNG-
 A C G T A C G T A C G T A G T C T C G A C T G A A C T G A G T C C G T A A C T G G T A C A C T G A G T C A C G T A C T G A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CAAGCAGCGCTGG
---NAACAGCTGG
 A G T C T C G A C T G A A C T G A G T C C G T A A C T G G T A C A C T G A G T C A C G T A C T G A C T G
A C G T A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CAAGCAGCGCTGG
CCTGCTGAGH---
 A G T C T C G A C T G A A C T G A G T C C G T A A C T G G T A C A C T G A G T C A C G T A C T G A C T G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T