Information for 5-GGAGAGCCTT (Motif 14)

A C T G T C A G C G T A A T C G T C G A A C T G A G T C A G T C C G A T A C G T
Reverse Opposite:
T G C A G C T A A C T G C T A G A G T C A G C T A T G C C G A T A G T C A G T C
p-value:1e-9
log p-value:-2.089e+01
Information Content per bp:1.848
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.06%
Number of Background Sequences with motif169.4
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets54.8 +/- 26.2bp
Average Position of motif in Background51.7 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGAGAGCCTT
CTTGAGTGGCT-
 A C G T A C G T A C T G T C A G C G T A A T C G T C G A A C T G A G T C A G T C C G A T A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGAGAGCCTT
TTGAGTGSTT-
 A C G T A C T G T C A G C G T A A T C G T C G A A C T G A G T C A G T C C G A T A C G T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGAGAGCCTT
---CAGCC--
 A C T G T C A G C G T A A T C G T C G A A C T G A G T C A G T C C G A T A C G T
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGAGAGCCTT---
NTCGCGCGCCTTNNN
 A C G T A C G T A C T G T C A G C G T A A T C G T C G A A C T G A G T C A G T C C G A T A C G T A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGAGAGCCTT---
ANCGCGCGCCCTTNN
 A C G T A C G T A C T G T C A G C G T A A T C G T C G A A C T G A G T C A G T C C G A T A C G T A C G T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGAGAGCCTT-
-AAGACCCYYN
 A C T G T C A G C G T A A T C G T C G A A C T G A G T C A G T C C G A T A C G T A C G T
A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGAGAGCCTT
BTBRAGTGSN--
 A C G T A C G T A C T G T C A G C G T A A T C G T C G A A C T G A G T C A G T C C G A T A C G T
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGAGAGCCTT-----
GGNGCGNCTGTTNNN
 A C T G T C A G C G T A A T C G T C G A A C T G A G T C A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGAGAGCCTT
CTYRAGTGSY--
 A C G T A C G T A C T G T C A G C G T A A T C G T C G A A C T G A G T C A G T C C G A T A C G T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGAGAGCCTT
DGGGYGKGGC--
 A C G T A C G T A C T G T C A G C G T A A T C G T C G A A C T G A G T C A G T C C G A T A C G T
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T