Information for 4-CGCAAAAAGC (Motif 12)

A T G C T C A G A G T C T C G A T C G A T G C A T C G A T C G A T C A G T A G C
Reverse Opposite:
A T C G A G T C A G C T A G C T A C G T A G C T A G C T T C A G A G T C T A C G
p-value:1e-9
log p-value:-2.212e+01
Information Content per bp:1.555
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif2.78%
Number of Background Sequences with motif293.4
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets48.3 +/- 26.9bp
Average Position of motif in Background49.7 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.64
Offset:6
Orientation:forward strand
Alignment:CGCAAAAAGC-
------CAGCC
 A T G C T C A G A G T C T C G A T C G A T G C A T C G A T C G A T C A G T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CGCAAAAAGC---
------AAGCTTG
 A T G C T C A G A G T C T C G A T C G A T G C A T C G A T C G A T C A G T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGCAAAAAGC--
GCCGCGCAGTGCGT
 A C G T A C G T A T G C T C A G A G T C T C G A T C G A T G C A T C G A T C G A T C A G T A G C A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

SPI1/MA0080.4/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGCAAAAAGC-------
---AAAAAGCGGAAGTA
 A T G C T C A G A G T C T C G A T C G A T G C A T C G A T C G A T C A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGCAAAAAGC
VRRACAAWGG
 A T G C T C A G A G T C T C G A T C G A T G C A T C G A T C G A T C A G T A G C
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CGCAAAAAGC
---ACAAAG-
 A T G C T C A G A G T C T C G A T C G A T G C A T C G A T C G A T C A G T A G C
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CGCAAAAAGC
TTCGCGCGAAAA--
 A C G T A C G T A C G T A C G T A T G C T C A G A G T C T C G A T C G A T G C A T C G A T C G A T C A G T A G C
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGCAAAAAGC----
TACCCACAATGCATTG
 A C G T A C G T A T G C T C A G A G T C T C G A T C G A T G C A T C G A T C G A T C A G T A G C A C G T A C G T A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CGCAAAAAGC-
ATTTCCCAGVAKSCY
 A C G T A C G T A C G T A C G T A T G C T C A G A G T C T C G A T C G A T G C A T C G A T C G A T C A G T A G C A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

BCL6B/MA0731.1/Jaspar

Match Rank:10
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------CGCAAAAAGC-
TGAATTCCTAGAAAGCA
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C T C A G A G T C T C G A T C G A T G C A T C G A T C G A T C A G T A G C A C G T
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A