Information for 9-CGTCCTTTCA (Motif 22)

G A T C T C A G A G C T T G A C G A T C C A G T G C A T A C G T A T G C C G T A
Reverse Opposite:
G C A T T A C G T G C A C G T A G T C A C T A G A C T G T C G A A G T C C T A G
p-value:1e-6
log p-value:-1.520e+01
Information Content per bp:1.661
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif8.89%
Number of Background Sequences with motif1733.9
Percentage of Background Sequences with motif3.66%
Average Position of motif in Targets45.7 +/- 24.2bp
Average Position of motif in Background50.9 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGTCCTTTCA--
NNGCACCTTTCTCC
 A C G T A C G T G A T C T C A G A G C T T G A C G A T C C A G T G C A T A C G T A T G C C G T A A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGTCCTTTCA-----
-TNCCTTTGATCTTN
 G A T C T C A G A G C T T G A C G A T C C A G T G C A T A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

PB0083.1_Tcf7_1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGTCCTTTCA------
NNTTCCTTTGATCTNNA
 A C G T G A T C T C A G A G C T T G A C G A T C C A G T G C A T A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CGTCCTTTCA---
---CCTTTGATGT
 G A T C T C A G A G C T T G A C G A T C C A G T G C A T A C G T A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGTCCTTTCA---
-TNCCTTTGATGT
 G A T C T C A G A G C T T G A C G A T C C A G T G C A T A C G T A T G C C G T A A C G T A C G T A C G T
A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGTCCTTTCA------
NNTTCCTTTGATCTANA
 A C G T G A T C T C A G A G C T T G A C G A T C C A G T G C A T A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CGTCCTTTCA---
---CCTTTGAWGT
 G A T C T C A G A G C T T G A C G A T C C A G T G C A T A C G T A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGTCCTTTCA------
ATTTCCTTTGATCTATA
 A C G T G A T C T C A G A G C T T G A C G A T C C A G T G C A T A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGTCCTTTCA
BNTGDCCTTG--
 A C G T A C G T G A T C T C A G A G C T T G A C G A T C C A G T G C A T A C G T A T G C C G T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGTCCTTTCA
ACTTCCTGTT-
 A C G T G A T C T C A G A G C T T G A C G A T C C A G T G C A T A C G T A T G C C G T A
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T