Information for 8-CCTGCAGTAT (Motif 19)

A G T C A G T C A C G T A C T G A G T C C G T A C T A G A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A G T C A C G T A C T G A G T C C G T A A C T G C T A G
p-value:1e-6
log p-value:-1.604e+01
Information Content per bp:1.938
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif22.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets40.5 +/- 29.8bp
Average Position of motif in Background48.9 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCAGTAT----
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C C G T A C T A G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCAGTAT
CCCCCTGCTGTG-
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C C G T A C T A G A C G T C G T A A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCTGCAGTAT----
CCTTGCAATTTTTNN
 A C G T A G T C A G T C A C G T A C T G A G T C C G T A C T A G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCTGCAGTAT---
NNTNNCAATATTAG
 A C G T A G T C A G T C A C G T A C T G A G T C C G T A C T A G A C G T C G T A A C G T A C G T A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCTGCAGTAT---
NNTNNCAATATTAG
 A C G T A G T C A G T C A C G T A C T G A G T C C G T A C T A G A C G T C G T A A C G T A C G T A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCAGTAT
SNGCACCTGCHS---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C C G T A C T A G A C G T C G T A A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCAGTAT--
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C C G T A C T A G A C G T C G T A A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCTGCAGTAT-
AGATGCAATCCC
 A C G T A G T C A G T C A C G T A C T G A G T C C G T A C T A G A C G T C G T A A C G T A C G T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCAGTAT
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C C G T A C T A G A C G T C G T A A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCTGCAGTAT----
--TGAATTATGCAT
 A G T C A G T C A C G T A C T G A G T C C G T A C T A G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T