Information for 18-GCTCCAAAAGAAA (Motif 34)

A C T G A G T C A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C
p-value:1e-3
log p-value:-8.725e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets19.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0116.1_Elf3_2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GCTCCAAAAGAAA----
GTTCAAAAAAAAAATTC
 A C T G A G T C A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTCCAAAAGAAA----
GTTAAAAAAAAAAATTA
 A C T G A G T C A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCTCCAAAAGAAA----
-TGCCAAAATAAACANN
 A C T G A G T C A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCTCCAAAAGAAA---
AACACCAAAACAAAGGA
 A C G T A C T G A G T C A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A C G T A A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCTCCAAAAGAAA
TACTGGAAAAAAAA
 A C G T A C T G A G T C A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A C G T A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PB0186.1_Tcf3_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTCCAAAAGAAA--
AGCCGAAAAAAAAAT
 A C T G A G T C A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A C G T A A C G T A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCTCCAAAAGAAA
GCTCCG-------
 A C T G A G T C A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A C G T A
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCTCCAAAAGAAA---
WNAGTCADAVTGAAACTN
 A C G T A C G T A C T G A G T C A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A C G T A A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCAAAAGAAA-
BAGTCATANTGAAAG
 A C G T A C T G A G T C A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A C G T A A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCTCCAAAAGAAA-
--TTCTNNAGAANT
 A C T G A G T C A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C T G C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T