Information for 3-ATATBTTDGAGCTCAT (Motif 3)

C G T A A C G T G T C A C G A T A C T G C G A T A C G T C A G T T C A G C G T A A C T G A G T C A C G T A G T C C G T A A G C T
Reverse Opposite:
C T G A A C G T C T A G C G T A C T A G A G T C C G A T A G T C G A C T C G T A C G T A T A G C C G T A A C G T G T C A C G A T
p-value:1e-9
log p-value:-2.078e+01
Information Content per bp:1.719
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif87.6
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets50.8 +/- 22.0bp
Average Position of motif in Background46.9 +/- 36.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:forward strand
Alignment:ATATBTTDGAGCTCAT
-----TTCAAGGTCAT
 C G T A A C G T G T C A C G A T A C T G C G A T A C G T C A G T T C A G C G T A A C T G A G T C A C G T A G T C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

RORA/MA0071.1/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:ATATBTTDGAGCTCAT
-----ATCAAGGTCA-
 C G T A A C G T G T C A C G A T A C T G C G A T A C G T C A G T T C A G C G T A A C T G A G T C A C G T A G T C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.54
Offset:7
Orientation:forward strand
Alignment:ATATBTTDGAGCTCAT
-------AGRGGTCA-
 C G T A A C G T G T C A C G A T A C T G C G A T A C G T C A G T T C A G C G T A A C T G A G T C A C G T A G T C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T

Vdr/MA0693.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ATATBTTDGAGCTCAT
GAGTTCATTGAGTTCA-
 A C G T C G T A A C G T G T C A C G A T A C T G C G A T A C G T C A G T T C A G C G T A A C T G A G T C A C G T A G T C C G T A A G C T
T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ATATBTTDGAGCTCAT
-GRTGMTRGAGCC---
 C G T A A C G T G T C A C G A T A C T G C G A T A C G T C A G T T C A G C G T A A C T G A G T C A C G T A G T C C G T A A G C T
A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:forward strand
Alignment:ATATBTTDGAGCTCAT-
------TCAAGGTCATA
 C G T A A C G T G T C A C G A T A C T G C G A T A C G T C A G T T C A G C G T A A C T G A G T C A C G T A G T C C G T A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:ATATBTTDGAGCTCAT
-----AATTTGCTGAC
 C G T A A C G T G T C A C G A T A C T G C G A T A C G T C A G T T C A G C G T A A C T G A G T C A C G T A G T C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.53
Offset:7
Orientation:forward strand
Alignment:ATATBTTDGAGCTCAT
-------TRAGGTCA-
 C G T A A C G T G T C A C G A T A C T G C G A T A C G T C A G T T C A G C G T A A C T G A G T C A C G T A G T C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:ATATBTTDGAGCTCAT
------TCAAGGTCAT
 C G T A A C G T G T C A C G A T A C T G C G A T A C G T C A G T T C A G C G T A A C T G A G T C A C G T A G T C C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ATATBTTDGAGCTCAT---
---TCTCAAAGGTCACCTG
 C G T A A C G T G T C A C G A T A C T G C G A T A C G T C A G T T C A G C G T A A C T G A G T C A C G T A G T C C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G