p-value: | 1e-3 |
log p-value: | -8.725e+00 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 1.0 |
Percentage of Target Sequences with motif | 8.33% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 41.0 +/- 0.0bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
CDX2/MA0465.1/Jaspar
Match Rank: | 1 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTTATAACTTGCA TTTTATGGCTN--- |
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Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTTATAACTTGCA NTTTTATGAC----- |
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTTATAACTTGCA DGWTTTATGRCN---- |
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HOXA10/MA0899.1/Jaspar
Match Rank: | 4 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTTATAACTTGCA NTTTTATTACN---- |
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CDX1/MA0878.1/Jaspar
Match Rank: | 5 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTTATAACTTGCA TTTTATTGC----- |
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POL012.1_TATA-Box/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | -8 |
Orientation: | reverse strand |
Alignment: | --------TTTATAACTTGCA NNNNNNCTTTTATAN------ |
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TBP/MA0108.2/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | -8 |
Orientation: | reverse strand |
Alignment: | --------TTTATAACTTGCA NNNNNNCTTTTATAN------ |
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PH0013.1_Cdx2/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTTATAACTTGCA NAATTTTATTACCNNN- |
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PH0063.1_Hoxb8/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTTATAACTTGCA--- TTTATTAATTGCNNGN |
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PH0064.1_Hoxb9/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TTTATAACTTGCA NGANTTTTATGGCTCN-- |
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