Information for 2-ATTGGACAAAGCATTA (Motif 2)

G T C A A G C T C G A T A C T G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A
Reverse Opposite:
C G A T C G T A C G T A C G A T C T A G A G T C A C G T A C G T C G A T A C T G A C G T A G T C A G T C C G T A C T G A A C G T
p-value:1e-10
log p-value:-2.341e+01
Information Content per bp:1.928
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.0 +/- 20.0bp
Average Position of motif in Background49.3 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATTGGACAAAGCATTA
AAACAGACAAAGGAAT-
 A C G T G T C A A G C T C G A T A C T G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATTGGACAAAGCATTA
--GGAACAAAGR----
 G T C A A G C T C G A T A C T G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:3
Score:0.59
Offset:7
Orientation:forward strand
Alignment:ATTGGACAAAGCATTA-
-------AAACMATTAN
 G T C A A G C T C G A T A C T G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ATTGGACAAAGCATTA
-----ACAAAG-----
 G T C A A G C T C G A T A C T G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ATTGGACAAAGCATTA
--VRRACAAWGG----
 G T C A A G C T C G A T A C T G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A
A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATTGGACAAAGCATTA
AGAAGAACAAAGGACTA
 A C G T G T C A A G C T C G A T A C T G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATTGGACAAAGCATTA
ATAAGAACAAAGGACTA
 A C G T G T C A A G C T C G A T A C T G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:ATTGGACAAAGCATTA
--AAAACAAAGG----
 G T C A A G C T C G A T A C T G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:ATTGGACAAAGCATTA-
-----ACAAAGGNBCCT
 G T C A A G C T C G A T A C T G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ATTGGACAAAGCATTA
----RACAAWGG----
 G T C A A G C T C G A T A C T G A C T G C G T A A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A
A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T