Information for 1-TTGATMTTCATTATTT (Motif 1)

A G C T C G A T C T A G C T G A A C G T G T C A A C G T A C G T G A T C C T G A A G C T A G C T C G T A G A C T A G C T A C G T
Reverse Opposite:
C G T A C T G A C G T A C G A T C T G A T C G A A G C T C A T G C G T A C G T A C A G T C G T A G A C T A G T C C G T A C T G A
p-value:1e-13
log p-value:-3.088e+01
Information Content per bp:1.694
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif138.7
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets44.0 +/- 27.5bp
Average Position of motif in Background46.5 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTGATMTTCATTATTT
TAGTGATCATCATTA---
 A C G T A C G T A G C T C G A T C T A G C T G A A C G T G T C A A C G T A C G T G A T C C T G A A G C T A G C T C G T A G A C T A G C T A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A A C G T A C G T A C G T

PH0172.1_Tlx2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTGATMTTCATTATTT-
AANTTATTAATTAATTA
 A G C T C G A T C T A G C T G A A C G T G T C A A C G T A C G T G A T C C T G A A G C T A G C T C G T A G A C T A G C T A C G T A C G T
G C A T C G T A C T A G G A C T G C A T C G T A C G A T G A C T C G T A C G T A G C A T C G A T C T G A G C T A G A C T C G A T T G C A

PH0018.1_Dbx1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTGATMTTCATTATTT-
TNATTATTAATTAATTA
 A G C T C G A T C T A G C T G A A C G T G T C A A C G T A C G T G A T C C T G A A G C T A G C T C G T A G A C T A G C T A C G T A C G T
G A C T C G T A G C T A A G C T G A C T C G T A C G A T G C A T C G T A C G T A G C A T C G A T C G T A C G T A G A C T C G A T C T G A

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTGATMTTCATTATTT
NAGATWNBNATCTNN-
 A G C T C G A T C T A G C T G A A C G T G T C A A C G T A C G T G A T C C T G A A G C T A G C T C G T A G A C T A G C T A C G T
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTGATMTTCATTATTT
TTTAAT-----------
 A C G T A G C T C G A T C T A G C T G A A C G T G T C A A C G T A C G T G A T C C T G A A G C T A G C T C G T A G A C T A G C T A C G T
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTGATMTTCATTATTT
NTTATTCGTCATNC---
 A C G T A G C T C G A T C T A G C T G A A C G T G T C A A C G T A C G T G A T C C T G A A G C T A G C T C G T A G A C T A G C T A C G T
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C A C G T A C G T A C G T

PH0019.1_Dbx2/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTGATMTTCATTATTT---
---NAATTAATTAATTNNN
 A G C T C G A T C T A G C T G A A C G T G T C A A C G T A C G T G A T C C T G A A G C T A G C T C G T A G A C T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G C G T A T G C A G C A T G A C T G T C A G C T A G A C T G C A T C T G A C G T A G C A T C A G T C T G A G T C A T C G A

Hoxd8/MA0910.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTGATMTTCATTATTT-
NAGCCATTAATTANTTA
 A G C T C G A T C T A G C T G A A C G T G T C A A C G T A C G T G A T C C T G A A G C T A G C T C G T A G A C T A G C T A C G T A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0080.1_Hoxd8/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTGATMTTCATTATTT-
NAGCCATTAATTANTTA
 A G C T C G A T C T A G C T G A A C G T G T C A A C G T A C G T G A T C C T G A A G C T A G C T C G T A G A C T A G C T A C G T A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0149.1_Pou3f4/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TTGATMTTCATTATTT----
---GANTTAATTAATTAANN
 A G C T C G A T C T A G C T G A A C G T G T C A A C G T A C G T G A T C C T G A A G C T A G C T C G T A G A C T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G G C T A G T C A G A C T C G A T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A C G T A A C G T G A C T