Information for 3-AGCTRAAGMGGCAGCT (Motif 8)

C G T A C A T G A G T C C G A T T C G A G T C A C G T A A C T G G T C A A T C G A C T G A T G C C G T A A C T G A G T C A G C T
Reverse Opposite:
C T G A A C T G A G T C G A C T A T C G A G T C A T G C C A G T G T A C A C G T C A G T A G C T C G T A A C T G G T A C C G A T
p-value:1e-12
log p-value:-2.798e+01
Information Content per bp:1.740
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.2 +/- 19.6bp
Average Position of motif in Background44.0 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGCTRAAGMGGCAGCT------
-----NNNNAGCAGCTGCTGAN
 C G T A C A T G A G T C C G A T T C G A G T C A C G T A A C T G G T C A A T C G A C T G A T G C C G T A A C T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:AGCTRAAGMGGCAGCT---
-------NNAGCAGCTGCT
 C G T A C A T G A G T C C G A T T C G A G T C A C G T A A C T G G T C A A T C G A C T G A T G C C G T A A C T G A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Myod1/MA0499.1/Jaspar

Match Rank:3
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AGCTRAAGMGGCAGCT---
------NGNGACAGCTGCN
 C G T A C A T G A G T C C G A T T C G A G T C A C G T A A C T G G T C A A T C G A C T G A T G C C G T A A C T G A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:AGCTRAAGMGGCAGCT---
---------AGCAGCTGCT
 C G T A C A T G A G T C C G A T T C G A G T C A C G T A A C T G G T C A A T C G A C T G A T G C C G T A A C T G A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.54
Offset:9
Orientation:forward strand
Alignment:AGCTRAAGMGGCAGCT----
---------GACAGCTGCAG
 C G T A C A T G A G T C C G A T T C G A G T C A C G T A A C T G G T C A A T C G A C T G A T G C C G T A A C T G A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:AGCTRAAGMGGCAGCT---
---------CGCAGCTGCG
 C G T A C A T G A G T C C G A T T C G A G T C A C G T A A C T G G T C A A T C G A C T G A T G C C G T A A C T G A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:AGCTRAAGMGGCAGCT--
--------CAGCAGCTGN
 C G T A C A T G A G T C C G A T T C G A G T C A C G T A A C T G G T C A A T C G A C T G A T G C C G T A A C T G A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

PH0171.1_Nkx2-1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGCTRAAGMGGCAGCT
AANTTCAAGTGGCTTN-
 A C G T C G T A C A T G A G T C C G A T T C G A G T C A C G T A A C T G G T C A A T C G A C T G A T G C C G T A A C T G A G T C A G C T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGCTRAAGMGGCAGCT
--CTYRAGTGSY----
 C G T A C A T G A G T C C G A T T C G A G T C A C G T A A C T G G T C A A T C G A C T G A T G C C G T A A C T G A G T C A G C T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGCTRAAGMGGCAGCT
--BTBRAGTGSN----
 C G T A C A T G A G T C C G A T T C G A G T C A C G T A A C T G G T C A A T C G A C T G A T G C C G T A A C T G A G T C A G C T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T