Information for 22-CACAAAGCCAAAA (Motif 26)

A T G C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A G C T A C G T A
Reverse Opposite:
A C G T C G A T A C G T A C G T A C T G A C T G A G T C A C G T A C G T C G A T A C T G C G A T A T C G
p-value:1e-7
log p-value:-1.795e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.2 +/- 24.3bp
Average Position of motif in Background38.7 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CACAAAGCCAAAA
-ACAAAG------
 A T G C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A G C T A C G T A
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CACAAAGCCAAAA
VRRACAAWGG-----
 A C G T A C G T A T G C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A G C T A C G T A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CACAAAGCCAAAA
TGGCACCATGCCAA--
 A C G T A C G T A C G T A T G C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A G C T A C G T A
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CACAAAGCCAAAA
--AAAAGTCAA--
 A T G C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A G C T A C G T A
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CACAAAGCCAAAA
-----TGCCAA--
 A T G C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A G C T A C G T A
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CACAAAGCCAAAA
---CGTGCCAAG-
 A T G C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A G C T A C G T A
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CACAAAGCCAAAA
GGAACAAAGR-----
 A C G T A C G T A T G C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A G C T A C G T A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CACAAAGCCAAAA
AAAACAAAGG-----
 A C G T A C G T A T G C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A G C T A C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CACAAAGCCAAAA
RACAAWGG-----
 A T G C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A G C T A C G T A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CACAAAGCCAAAA
--CAAGGHCANV-
 A T G C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A G C T A C G T A
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T