Information for 2-CATTCAAATGCAAATG (Motif 2)

T A G C C G T A A C G T A C G T A T G C C G T A G C T A C G T A A C G T C T A G A G T C C G T A C T G A C G T A A C G T A C T G
Reverse Opposite:
T G A C G T C A A C G T A G C T C G A T T C A G A G T C G T C A A C G T C G A T C G A T T A C G C G T A C G T A G C A T A T C G
p-value:1e-33
log p-value:-7.624e+01
Information Content per bp:1.759
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.6 +/- 22.7bp
Average Position of motif in Background41.7 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:CATTCAAATGCAAATG
CATTGTTATGCAAAT-
 T A G C C G T A A C G T A C G T A T G C C G T A G C T A C G T A A C G T C T A G A G T C C G T A C T G A C G T A A C G T A C T G
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:2
Score:0.88
Offset:0
Orientation:forward strand
Alignment:CATTCAAATGCAAATG
CTTTGTTATGCAAAT-
 T A G C C G T A A C G T A C G T A T G C C G T A G C T A C G T A A C G T C T A G A G T C C G T A C T G A C G T A A C G T A C T G
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.79
Offset:5
Orientation:reverse strand
Alignment:CATTCAAATGCAAATG--
-----ATATGCAAATNNN
 T A G C C G T A A C G T A C G T A T G C C G T A G C T A C G T A A C G T C T A G A G T C C G T A C T G A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.78
Offset:5
Orientation:forward strand
Alignment:CATTCAAATGCAAATG
-----ATATGCAAAT-
 T A G C C G T A A C G T A C G T A T G C C G T A G C T A C G T A A C G T C T A G A G T C C G T A C T G A C G T A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.78
Offset:5
Orientation:reverse strand
Alignment:CATTCAAATGCAAATG
-----TTATGCAAAT-
 T A G C C G T A A C G T A C G T A T G C C G T A G C T A C G T A A C G T C T A G A G T C C G T A C T G A C G T A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.75
Offset:6
Orientation:forward strand
Alignment:CATTCAAATGCAAATG--
------WATGCAAATGAG
 T A G C C G T A A C G T A C G T A T G C C G T A G C T A C G T A A C G T C T A G A G T C C G T A C T G A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.75
Offset:3
Orientation:forward strand
Alignment:CATTCAAATGCAAATG---
---TTGTATGCAAATTAGA
 T A G C C G T A A C G T A C G T A T G C C G T A G C T A C G T A A C G T C T A G A G T C C G T A C T G A C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.75
Offset:3
Orientation:forward strand
Alignment:CATTCAAATGCAAATG---
---TTGTATGCAAATTAGA
 T A G C C G T A A C G T A C G T A T G C C G T A G C T A C G T A A C G T C T A G A G T C C G T A C T G A C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.75
Offset:6
Orientation:forward strand
Alignment:CATTCAAATGCAAATG--
------TATGCWAATBAV
 T A G C C G T A A C G T A C G T A T G C C G T A G C T A C G T A A C G T C T A G A G T C C G T A C T G A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.75
Offset:3
Orientation:forward strand
Alignment:CATTCAAATGCAAATG---
---TTGTATGCAAATTAGA
 T A G C C G T A A C G T A C G T A T G C C G T A G C T A C G T A A C G T C T A G A G T C C G T A C T G A C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A