p-value: | 1e-10 |
log p-value: | -2.483e+01 |
Information Content per bp: | 1.913 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.58% |
Number of Background Sequences with motif | 1.7 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 47.8 +/- 23.4bp |
Average Position of motif in Background | 33.3 +/- 9.7bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ACCTGGCAGGGAA -CTTGGCAA---- |
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Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ACCTGGCAGGGAA GGGGCTYGKCTGGGA- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ACCTGGCAGGGAA -NTTGGCANN--- |
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NFIC/MA0161.1/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ACCTGGCAGGGAA --TTGGCA----- |
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PB0167.1_Sox13_2/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -ACCTGGCAGGGAA--- GTATTGGGTGGGTAATT |
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Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ACCTGGCAGGGAA ARNTGACA----- |
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Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ACCTGGCAGGGAA -VBTGWCAGCB-- |
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E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ACCTGGCAGGGAA --CWGGCGGGAA- |
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E2F6/MA0471.1/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | ACCTGGCAGGGAA-- ----GGGCGGGAAGG |
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PB0164.1_Smad3_2/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ACCTGGCAGGGAA-- NAGANTGGCGGGGNGNA |
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