Information for 7-CTTGAATACACAC (Motif 10)

A G T C A G C T C G A T A C T G C G T A C G T A A C G T C G T A A G T C C G T A T A G C C G T A A G T C
Reverse Opposite:
T A C G C G A T A T C G C G A T A C T G A C G T C G T A A C G T C G A T A G T C C G T A C T G A C T A G
p-value:1e-13
log p-value:-3.176e+01
Information Content per bp:1.855
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.9 +/- 22.5bp
Average Position of motif in Background57.0 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTTGAATACACAC
-TCCAATCCACA-
 A G T C A G C T C G A T A C T G C G T A C G T A A C G T C G T A A G T C C G T A T A G C C G T A A G T C
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTTGAATACACAC-
--SSAATCCACANN
 A G T C A G C T C G A T A C T G C G T A C G T A A C G T C G T A A G T C C G T A T A G C C G T A A G T C A C G T
A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTTGAATACACAC
-ATGMATATDC--
 A G T C A G C T C G A T A C T G C G T A C G T A A C G T C G T A A G T C C G T A T A G C C G T A A G T C
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:4
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------CTTGAATACACAC---
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T C G A T A C T G C G T A C G T A A C G T C G T A A G T C C G T A T A G C C G T A A G T C A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTTGAATACACAC
CNTGTTTACATA-
 A G T C A G C T C G A T A C T G C G T A C G T A A C G T C G T A A G T C C G T A T A G C C G T A A G T C
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTTGAATACACAC-
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A G T C A G C T C G A T A C T G C G T A C G T A A C G T C G T A A G T C C G T A T A G C C G T A A G T C A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTTGAATACACAC---
-ATGAATATTCATGAG
 A G T C A G C T C G A T A C T G C G T A C G T A A C G T C G T A A G T C C G T A T A G C C G T A A G T C A C G T A C G T A C G T
A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CTTGAATACACAC
NNTNTCATGAATGT----
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T C G A T A C T G C G T A C G T A A C G T C G T A A G T C C G T A T A G C C G T A A G T C
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTTGAATACACAC
TACCCTAGTTACCGA-
 A C G T A C G T A C G T A G T C A G C T C G A T A C T G C G T A C G T A A C G T C G T A A G T C C G T A T A G C C G T A A G T C
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTTGAATACACAC-
NNNNTGAATTCANNNC
 A C G T A C G T A G T C A G C T C G A T A C T G C G T A C G T A A C G T C G T A A G T C C G T A T A G C C G T A A G T C A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C