Information for 5-VGAGTGGGAAGCT (Motif 6)

T C A G A C T G G T C A A C T G A C G T A C T G C T A G A C T G C G T A C G T A A C T G A G T C A C G T
Reverse Opposite:
G T C A T A C G A G T C G C A T G C A T G T A C A G T C A G T C T C G A A G T C A C G T G T A C A G C T
p-value:1e-10
log p-value:-2.531e+01
Information Content per bp:1.749
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif3.13%
Number of Background Sequences with motif31.6
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets50.3 +/- 24.6bp
Average Position of motif in Background59.2 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---VGAGTGGGAAGCT
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T T C A G A C T G G T C A A C T G A C G T A C T G C T A G A C T G C G T A C G T A A C T G A G T C A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:VGAGTGGGAAGCT
-GGGCGGGAAGG-
 T C A G A C T G G T C A A C T G A C G T A C T G C T A G A C T G C G T A C G T A A C T G A G T C A C G T
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:VGAGTGGGAAGCT
NGCGTGGGCGGR-
 T C A G A C T G G T C A A C T G A C G T A C T G C T A G A C T G C G T A C G T A A C T G A G T C A C G T
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:VGAGTGGGAAGCT
GGAGGGGGAA---
 T C A G A C T G G T C A A C T G A C G T A C T G C T A G A C T G C G T A C G T A A C T G A G T C A C G T
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:VGAGTGGGAAGCT-
GGCGGGGGCGGGGG
 T C A G A C T G G T C A A C T G A C G T A C T G C T A G A C T G C G T A C G T A A C T G A G T C A C G T A C G T
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:VGAGTGGGAAGCT
--GGCGGGAARN-
 T C A G A C T G G T C A A C T G A C G T A C T G C T A G A C T G C G T A C G T A A C T G A G T C A C G T
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

E2F4/MA0470.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:VGAGTGGGAAGCT
-GGGCGGGAAGG-
 T C A G A C T G G T C A A C T G A C G T A C T G C T A G A C T G C G T A C G T A A C T G A G T C A C G T
A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:VGAGTGGGAAGCT
TGCGTGGGYG---
 T C A G A C T G G T C A A C T G A C G T A C T G C T A G A C T G C G T A C G T A A C T G A G T C A C G T
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--VGAGTGGGAAGCT
BTBRAGTGSN-----
 A C G T A C G T T C A G A C T G G T C A A C T G A C G T A C T G C T A G A C T G C G T A C G T A A C T G A G T C A C G T
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-VGAGTGGGAAGCT
TTRAGTGSYK----
 A C G T T C A G A C T G G T C A A C T G A C G T A C T G C T A G A C T G C G T A C G T A A C T G A G T C A C G T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T