Information for 19-CGCGGCRTTTTGC (Motif 25)

A T G C A C T G A G T C A C T G C T A G A T G C T C G A A G C T A C G T A G C T A C G T A T C G A G T C
Reverse Opposite:
A C T G A T G C C G T A C T G A G T C A C T G A A G C T A T C G A G T C A G T C A C T G G T A C A T C G
p-value:1e-8
log p-value:-1.982e+01
Information Content per bp:1.796
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets61.4 +/- 31.0bp
Average Position of motif in Background54.8 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CGCGGCRTTTTGC
---GGGGATTTCC
 A T G C A C T G A G T C A C T G C T A G A T G C T C G A A G C T A C G T A G C T A C G T A T C G A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CGCGGCRTTTTGC
---GGGAATTTCC
 A T G C A C T G A G T C A C T G C T A G A T G C T C G A A G C T A C G T A G C T A C G T A T C G A G T C
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CGCGGCRTTTTGC
---GGGAATTTCC
 A T G C A C T G A G T C A C T G C T A G A T G C T C G A A G C T A C G T A G C T A C G T A T C G A G T C
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CGCGGCRTTTTGC
---GGGGATTTCC
 A T G C A C T G A G T C A C T G C T A G A T G C T C G A A G C T A C G T A G C T A C G T A T C G A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.61
Offset:7
Orientation:forward strand
Alignment:CGCGGCRTTTTGC-
-------TTTTCCA
 A T G C A C T G A G T C A C T G C T A G A T G C T C G A A G C T A C G T A G C T A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFATC3/MA0625.1/Jaspar

Match Rank:6
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CGCGGCRTTTTGC---
------ATTTTCCATT
 A T G C A C T G A G T C A C T G C T A G A T G C T C G A A G C T A C G T A G C T A C G T A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

E2F2/MA0864.1/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CGCGGCRTTTTGC
AAAATGGCGCCATTTT--
 A C G T A C G T A C G T A C G T A C G T A T G C A C T G A G T C A C T G C T A G A T G C T C G A A G C T A C G T A G C T A C G T A T C G A G T C
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CGCGGCRTTTTGC---
------ATTTTCCATT
 A T G C A C T G A G T C A C T G C T A G A T G C T C G A A G C T A C G T A G C T A C G T A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

E2F3/MA0469.2/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CGCGGCRTTTTGC
AAAAATGGCGCCATTTTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A G T C A C T G C T A G A T G C T C G A A G C T A C G T A G C T A C G T A T C G A G T C
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CGCGGCRTTTTGC---
------ATTTTCCATT
 A T G C A C T G A G T C A C T G C T A G A T G C T C G A A G C T A C G T A G C T A C G T A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T