Information for 13-GACAGYGGCTCCA (Motif 16)

A T C G C T G A A G T C C G T A A T C G A G C T A C T G A C T G A G T C A C G T A G T C G T A C C G T A
Reverse Opposite:
A C G T A C T G A C T G G T C A C T A G G T A C A G T C C T G A A T G C G A C T A C T G A G C T A T G C
p-value:1e-10
log p-value:-2.512e+01
Information Content per bp:1.833
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif14.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets62.0 +/- 23.0bp
Average Position of motif in Background30.4 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GACAGYGGCTCCA-----
------GGCTCYAKCAYC
 A T C G C T G A A G T C C G T A A T C G A G C T A C T G A C T G A G T C A C G T A G T C G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GACAGYGGCTCCA-----
-CCTTCGGCGCCAAAAGG
 A T C G C T G A A G T C C G T A A T C G A G C T A C T G A C T G A G T C A C G T A G T C G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GACAGYGGCTCCA-----
-AGCTCGGCGCCAAAAGC
 A T C G C T G A A G T C C G T A A T C G A G C T A C T G A C T G A G T C A C G T A G T C G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GACAGYGGCTCCA
ADGGYAGYAGCATCT
 A C G T A C G T A T C G C T G A A G T C C G T A A T C G A G C T A C T G A C T G A G T C A C G T A G T C G T A C C G T A
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

E2F1/MA0024.3/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GACAGYGGCTCCA--
---TTTGGCGCCAAA
 A T C G C T G A A G T C C G T A A T C G A G C T A C T G A C T G A G T C A C G T A G T C G T A C C G T A A C G T A C G T
A C G T A C G T A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GACAGYGGCTCCA-
TGCCTGCGYCMCCTT
 A C G T A T C G C T G A A G T C C G T A A T C G A G C T A C T G A C T G A G T C A C G T A G T C G T A C C G T A A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GACAGYGGCTCCA
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A T C G C T G A A G T C C G T A A T C G A G C T A C T G A C T G A G T C A C G T A G T C G T A C C G T A
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GACAGYGGCTCCA
AGCAACAGCCGCACC-
 A C G T A C G T A C G T A T C G C T G A A G T C C G T A A T C G A G C T A C T G A C T G A G T C A C G T A G T C G T A C C G T A
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GACAGYGGCTCCA
ANTGCCTGAGGCAAN-
 A C G T A C G T A C G T A T C G C T G A A G T C C G T A A T C G A G C T A C T G A C T G A G T C A C G T A G T C G T A C C G T A
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GACAGYGGCTCCA
TGCCTGAGGCN---
 A C G T A T C G C T G A A G T C C G T A A T C G A G C T A C T G A C T G A G T C A C G T A G T C G T A C C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T