Information for 2-CWCAAAATGGCKGCCK (Motif 4)

G A T C G C T A G A T C G C T A T C G A C T G A C T G A A C G T A C T G A T C G G T A C A C T G C A T G A T G C G T A C C A G T
Reverse Opposite:
G T C A C A T G A T C G G A T C T G A C A C T G A T G C A G T C C G T A A G C T G A C T A C G T C G A T C T A G C G A T C A T G
p-value:1e-23
log p-value:-5.298e+01
Information Content per bp:1.700
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif18.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets50.1 +/- 25.9bp
Average Position of motif in Background53.9 +/- 35.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.89
Offset:2
Orientation:forward strand
Alignment:CWCAAAATGGCKGCCK
--CAAGATGGCGGC--
 G A T C G C T A G A T C G C T A T C G A C T G A C T G A A C G T A C T G A T C G G T A C A C T G C A T G A T G C G T A C C A G T
A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.87
Offset:2
Orientation:forward strand
Alignment:CWCAAAATGGCKGCCK
--CAAGATGGCGGC--
 G A T C G C T A G A T C G C T A T C G A C T G A C T G A A C G T A C T G A T C G G T A C A C T G C A T G A T G C G T A C C A G T
A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:CWCAAAATGGCKGCCK
----TAATGGCGGNC-
 G A T C G C T A G A T C G C T A T C G A C T G A C T G A A C G T A C T G A T C G G T A C A C T G C A T G A T G C G T A C C A G T
A C G T A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T

E2F2/MA0864.1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CWCAAAATGGCKGCCK---
---AAAATGGCGCCATTTT
 G A T C G C T A G A T C G C T A T C G A C T G A C T G A A C G T A C T G A T C G G T A C A C T G C A T G A T G C G T A C C A G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

E2F3/MA0469.2/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CWCAAAATGGCKGCCK----
--AAAAATGGCGCCATTTTT
 G A T C G C T A G A T C G C T A T C G A C T G A C T G A A C G T A C T G A T C G G T A C A C T G C A T G A T G C G T A C C A G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CWCAAAATGGCKGCCK
CTCACACAATGGCGC---
 A C G T A C G T G A T C G C T A G A T C G C T A T C G A C T G A C T G A A C G T A C T G A T C G G T A C A C T G C A T G A T G C G T A C C A G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CWCAAAATGGCKGCCK
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T G A T C G C T A G A T C G C T A T C G A C T G A C T G A A C G T A C T G A T C G G T A C A C T G C A T G A T G C G T A C C A G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CWCAAAATGGCKGCCK---
--NAGANTGGCGGGGNGNA
 G A T C G C T A G A T C G C T A T C G A C T G A C T G A A C G T A C T G A T C G G T A C A C T G C A T G A T G C G T A C C A G T A C G T A C G T A C G T
A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CWCAAAATGGCKGCCK
CCAAAAATAG------
 G A T C G C T A G A T C G C T A T C G A C T G A C T G A A C G T A C T G A T C G G T A C A C T G C A T G A T G C G T A C C A G T
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CWCAAAATGGCKGCCK
VRAACAATGG------
 G A T C G C T A G A T C G C T A T C G A C T G A C T G A A C G T A C T G A T C G G T A C A C T G C A T G A T G C G T A C C A G T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T