Information for 15-GGCTCTCTGG (Motif 20)

A C T G A C T G A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C
p-value:1e-5
log p-value:-1.221e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif13.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets61.6 +/- 13.7bp
Average Position of motif in Background44.6 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGCTCTCTGG-----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGCTCTCTGG
VBSYGTCTGG
 A C T G A C T G A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGCTCTCTGG
--CTGTCTGG
 A C T G A C T G A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGCTCTCTGG---
---GGTCTGGCAT
 A C T G A C T G A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCTCTCTGG
AGCCACTCAAG
 A C G T A C T G A C T G A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGCTCTCTGG
NGCTN-----
 A C T G A C T G A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGCTCTCTGG---
ACCACTCTCGGTCAC
 A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGCTCTCTGG
GGCGCGCT--
 A C T G A C T G A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGCTCTCTGG---
--GTCTGTGGTTT
 A C T G A C T G A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGCTCTCTGG-----
RGSMTBCTGGGAAAT
 A C T G A C T G A G T C A C G T A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T