Information for 17-AATAATTTTATCC (Motif 15)

C G T A C T G A A C G T C G T A G T C A A C G T A C G T A C G T A C G T C G T A A G C T G T A C A G T C
Reverse Opposite:
A C T G A C T G C T G A A C G T C G T A C G T A C G T A C G T A A C G T A C G T G T C A A G C T A C G T
p-value:1e-10
log p-value:-2.486e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.2 +/- 26.2bp
Average Position of motif in Background46.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AATAATTTTATCC
AATAATT------
 C G T A C T G A A C G T C G T A G T C A A C G T A C G T A C G T A C G T C G T A A G C T G T A C A G T C
G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AATAATTTTATCC----
ANTAATTTTATGGCCGN
 C G T A C T G A A C G T C G T A G T C A A C G T A C G T A C G T A C G T C G T A A G C T G T A C A G T C A C G T A C G T A C G T A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----AATAATTTTATCC
TNCNNAACAATTTTTNC-
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T C G T A G T C A A C G T A C G T A C G T A C G T C G T A A G C T G T A C A G T C
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----AATAATTTTATCC
NNCNNAACAATTNT----
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T C G T A G T C A A C G T A C G T A C G T A C G T C G T A A G C T G T A C A G T C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AATAATTTTATCC----
NTNAATTTTATTGNATT
 C G T A C T G A A C G T C G T A G T C A A C G T A C G T A C G T A C G T C G T A A G C T G T A C A G T C A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AATAATTTTATCC----
-NNANTTTTATTGGNNN
 C G T A C T G A A C G T C G T A G T C A A C G T A C G T A C G T A C G T C G T A A G C T G T A C A G T C A C G T A C G T A C G T A C G T
A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0124.1_Obox5_1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AATAATTTTATCC-----
-NANANTTAATCCCNNNN
 C G T A C T G A A C G T C G T A G T C A A C G T A C G T A C G T A C G T C G T A A G C T G T A C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

PB0197.1_Zfp105_2/Jaspar

Match Rank:8
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------AATAATTTTATCC
ATGGTTCAATAATTTTG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C G T C G T A G T C A A C G T A C G T A C G T A C G T C G T A A G C T G T A C A G T C
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AATAATTTTATCC
NNGTANTGTTTTNC
 A C G T C G T A C T G A A C G T C G T A G T C A A C G T A C G T A C G T A C G T C G T A A G C T G T A C A G T C
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

Dlx1/MA0879.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AATAATTTTATCC
NNTAATTANN---
 C G T A C T G A A C G T C G T A G T C A A C G T A C G T A C G T A C G T C G T A A G C T G T A C A G T C
T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G A C G T A C G T A C G T