p-value: | 1e-13 |
log p-value: | -3.092e+01 |
Information Content per bp: | 1.875 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.73% |
Number of Background Sequences with motif | 1.3 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 67.0 +/- 22.1bp |
Average Position of motif in Background | 8.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
Match Rank: | 1 |
Score: | 0.78 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | RGATGATKAATKM ---TGATTGATGA |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
Match Rank: | 2 |
Score: | 0.77 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | RGATGATKAATKM- --ATGATKGATGRC |
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Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
Match Rank: | 3 |
Score: | 0.74 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | RGATGATKAATKM-- ---TGATTRATGGCY |
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Lhx3/MA0135.1/Jaspar
Match Rank: | 4 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | RGATGATKAATKM GATTAATTAATTT |
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PH0017.1_Cux1_2/Jaspar
Match Rank: | 5 |
Score: | 0.67 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---RGATGATKAATKM TAATGATGATCACTA- |
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POU4F3/MA0791.1/Jaspar
Match Rank: | 6 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --RGATGATKAATKM- ATGCATAATTAATGAG |
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Hoxa9/MA0594.1/Jaspar
Match Rank: | 7 |
Score: | 0.66 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | RGATGATKAATKM- ---TGATTTATGGC |
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PH0142.1_Pou1f1/Jaspar
Match Rank: | 8 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -RGATGATKAATKM--- GANTTAATTAATTANNN |
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PH0120.1_Nkx6-3/Jaspar
Match Rank: | 9 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | RGATGATKAATKM----- -GAAAATTAATTACTTTG |
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PH0119.1_Nkx6-1_2/Jaspar
Match Rank: | 10 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -RGATGATKAATKM-- GANGTAATTAATTANN |
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