Information for 8-CCRGKAACCCWRACAC (Motif 29)

A G T C A G T C C T G A A C T G A C T G C G T A C T G A A G T C A G T C A G T C C G A T C T A G C T G A A G T C C G T A A T G C
Reverse Opposite:
A T C G A C G T A C T G A G C T A G T C C G T A A C T G A C T G A C T G A G C T A C G T G T A C A G T C A G C T A C T G A C T G
p-value:1e-6
log p-value:-1.396e+01
Information Content per bp:1.886
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 34.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCRGKAACCCWRACAC----
---CAAATCCAGACATCACA
 A G T C A G T C C T G A A C T G A C T G C G T A C T G A A G T C A G T C A G T C C G A T C T A G C T G A A G T C C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

INSM1/MA0155.1/Jaspar

Match Rank:2
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCRGKAACCCWRACAC
---CGCCCCCTGACA-
 A G T C A G T C C T G A A C T G A C T G C G T A C T G A A G T C A G T C A G T C C G A T C T A G C T G A A G T C C G T A A T G C
A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCRGKAACCCWRACAC
TCAGNGAGCGTGAC--
 A G T C A G T C C T G A A C T G A C T G C G T A C T G A A G T C A G T C A G T C C G A T C T A G C T G A A G T C C G T A A T G C
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCRGKAACCCWRACAC
CTTCCNGGAA---------
 A C G T A C G T A C G T A G T C A G T C C T G A A C T G A C T G C G T A C T G A A G T C A G T C A G T C C G A T C T A G C T G A A G T C C G T A A T G C
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCRGKAACCCWRACAC----
---AACACCAAAACAAAGGA
 A G T C A G T C C T G A A C T G A C T G C G T A C T G A A G T C A G T C A G T C C G A T C T A G C T G A A G T C C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:CCRGKAACCCWRACAC
--------CCAGACAG
 A G T C A G T C C T G A A C T G A C T G C G T A C T G A A G T C A G T C A G T C C G A T C T A G C T G A A G T C C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Spz1/MA0111.1/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CCRGKAACCCWRACAC
GCTGTTACCCT-----
 A G T C A G T C C T G A A C T G A C T G C G T A C T G A A G T C A G T C A G T C C G A T C T A G C T G A A G T C C G T A A T G C
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:CCRGKAACCCWRACAC--
--------CCAGACRSVB
 A G T C A G T C C T G A A C T G A C T G C G T A C T G A A G T C A G T C A G T C C G A T C T A G C T G A A G T C C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:9
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----CCRGKAACCCWRACAC
NCTTCCNGGAAGNN------
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A A C T G A C T G C G T A C T G A A G T C A G T C A G T C C G A T C T A G C T G A A G T C C G T A A T G C
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-CCRGKAACCCWRACAC
ANCAGGATGT-------
 A C G T A G T C A G T C C T G A A C T G A C T G C G T A C T G A A G T C A G T C A G T C C G A T C T A G C T G A A G T C C G T A A T G C
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T