Information for 6-GTGATGCTCMGTGAAA (Motif 23)

A C T G A G C T A C T G C G T A A C G T C T A G G T A C C A G T A G T C G T A C A C T G A C G T A C T G C T G A C T G A T C G A
Reverse Opposite:
A C G T A G C T A G C T A G T C C G T A T A G C A C T G A C T G G C T A A C T G A G T C T G C A G A C T A G T C C T G A A G T C
p-value:1e-8
log p-value:-1.940e+01
Information Content per bp:1.739
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.3 +/- 25.2bp
Average Position of motif in Background38.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTGATGCTCMGTGAAA
GTCACGCTCNCTGA--
 A C T G A G C T A C T G C G T A A C G T C T A G G T A C C A G T A G T C G T A C A C T G A C G T A C T G C T G A C T G A T C G A
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTGATGCTCMGTGAAA
TAATGATGATCACTA---
 A C G T A C G T A C T G A G C T A C T G C G T A A C G T C T A G G T A C C A G T A G T C G T A C A C T G A C G T A C T G C T G A C T G A T C G A
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A A C G T A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GTGATGCTCMGTGAAA
GGGCGATGACCAYTC---
 A C G T A C G T A C T G A G C T A C T G C G T A A C G T C T A G G T A C C A G T A G T C G T A C A C T G A C G T A C T G C T G A C T G A T C G A
C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C A C G T A C G T A C G T

SA0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---GTGATGCTCMGTGAAA-
AANGTGAAGNANNGTNAAGG
 A C G T A C G T A C G T A C T G A G C T A C T G C G T A A C G T C T A G G T A C C A G T A G T C G T A C A C T G A C G T A C T G C T G A C T G A T C G A A C G T
G C T A T C G A C T A G A C T G A C G T C T A G T C G A T C G A C T A G C G T A C T G A T C A G C T A G C T A G C G A T C G T A C G T A C T G A T C A G C T A G

PH0162.1_Six2/Jaspar

Match Rank:5
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----GTGATGCTCMGTGAAA
ANANGTGATACCCCATT---
 A C G T A C G T A C G T A C G T A C T G A G C T A C T G C G T A A C G T C T A G G T A C C A G T A G T C G T A C A C T G A C G T A C T G C T G A C T G A T C G A
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.48
Offset:5
Orientation:forward strand
Alignment:GTGATGCTCMGTGAAA
-----GCTCCG-----
 A C T G A G C T A C T G C G T A A C G T C T A G G T A C C A G T A G T C G T A C A C T G A C G T A C T G C T G A C T G A T C G A
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

Six3/MA0631.1/Jaspar

Match Rank:7
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----GTGATGCTCMGTGAAA
ANANGTGATACCCTATN---
 A C G T A C G T A C G T A C G T A C T G A G C T A C T G C G T A A C G T C T A G G T A C C A G T A G T C G T A C A C T G A C G T A C T G C T G A C T G A T C G A
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C A C G T A C G T A C G T

PH0163.1_Six3/Jaspar

Match Rank:8
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----GTGATGCTCMGTGAAA
ANANGTGATACCCTATN---
 A C G T A C G T A C G T A C G T A C T G A G C T A C T G C G T A A C G T C T A G G T A C C A G T A G T C G T A C A C T G A C G T A C T G C T G A C T G A T C G A
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.47
Offset:9
Orientation:forward strand
Alignment:GTGATGCTCMGTGAAA---
---------ACTGAAACCA
 A C T G A G C T A C T G C G T A A C G T C T A G G T A C C A G T A G T C G T A C A C T G A C G T A C T G C T G A C T G A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

PB0005.1_Bbx_1/Jaspar

Match Rank:10
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:GTGATGCTCMGTGAAA--
---NANTTCATTGAATTA
 A C T G A G C T A C T G C G T A A C G T C T A G G T A C C A G T A G T C G T A C A C T G A C G T A C T G C T G A C T G A T C G A A C G T A C G T
A C G T A C G T A C G T G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A